Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EGH13_RS03380 | Genome accession | NZ_CP034022 |
| Coordinates | 545015..545539 (+) | Length | 174 a.a. |
| NCBI ID | WP_003695064.1 | Uniprot ID | Q5F7Y0 |
| Organism | Neisseria gonorrhoeae strain FQ36 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 540015..550539
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGH13_RS03350 (EGH13_03350) | - | 540411..541234 (+) | 824 | Protein_555 | opacity family porin | - |
| EGH13_RS13375 | - | 541248..541421 (+) | 174 | WP_165865280.1 | hypothetical protein | - |
| EGH13_RS03355 (EGH13_03355) | - | 541599..542089 (+) | 491 | Protein_557 | transposase | - |
| EGH13_RS03360 (EGH13_03360) | - | 542126..542392 (+) | 267 | Protein_558 | transposase | - |
| EGH13_RS03370 (EGH13_03370) | - | 542894..543517 (+) | 624 | WP_003688215.1 | lytic transglycosylase domain-containing protein | - |
| EGH13_RS03375 (EGH13_03375) | - | 543629..545011 (+) | 1383 | WP_003688217.1 | MFS transporter | - |
| EGH13_RS03380 (EGH13_03380) | ssb | 545015..545539 (+) | 525 | WP_003695064.1 | single-stranded DNA-binding protein | Machinery gene |
| EGH13_RS03390 (EGH13_03390) | - | 545912..546835 (+) | 924 | WP_003695068.1 | DMT family transporter | - |
| EGH13_RS03395 (EGH13_03395) | fumC | 546900..548288 (-) | 1389 | WP_003691001.1 | class II fumarate hydratase | - |
| EGH13_RS03400 (EGH13_03400) | recP/tkt | 548432..550411 (-) | 1980 | WP_003688227.1 | transketolase | Machinery gene |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 19448.66 Da Isoelectric Point: 5.8313
>NTDB_id=287174 EGH13_RS03380 WP_003695064.1 545015..545539(+) (ssb) [Neisseria gonorrhoeae strain FQ36]
MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQRVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRI
QSRKYQGKDGIERTAYDIVANEMKMLGGRNENSGGAPYDEGYGQSQEAYQRPAQQSRQPAPDAPSHPQEAPAAPRRQPVP
AAAPVEDIDDDIPF
MSLNKVILIGRLGRDPEVRYMPNGEAVCNFSVATSETWNDRNGQRVERTEWHNITMYRKLAEIAGQYLKKGGLVYLEGRI
QSRKYQGKDGIERTAYDIVANEMKMLGGRNENSGGAPYDEGYGQSQEAYQRPAQQSRQPAPDAPSHPQEAPAAPRRQPVP
AAAPVEDIDDDIPF
Nucleotide
Download Length: 525 bp
>NTDB_id=287174 EGH13_RS03380 WP_003695064.1 545015..545539(+) (ssb) [Neisseria gonorrhoeae strain FQ36]
ATGTCATTGAACAAAGTCATCCTTATCGGCCGCCTCGGACGCGATCCCGAAGTGCGCTATATGCCCAACGGCGAGGCAGT
GTGTAATTTCAGCGTCGCCACCAGCGAAACTTGGAACGACCGCAACGGCCAGCGCGTAGAGCGCACCGAATGGCACAACA
TCACGATGTACCGCAAACTGGCGGAAATTGCCGGGCAATACCTCAAAAAAGGCGGGCTGGTTTATCTGGAAGGCAGAATC
CAAAGCCGCAAATACCAAGGCAAAGACGGCATCGAACGCACCGCTTACGATATTGTCGCCAATGAAATGAAAATGTTGGG
CGGGCGCAATGAAAACAGCGGCGGCGCGCCTTACGATGAAGGTTACGGTCAGAGTCAGGAGGCTTACCAACGCCCCGCTC
AGCAAAGCCGGCAGCCCGCTCCCGACGCGCCGTCCCATCCCCAAGAAGCACCCGCCGCGCCGCGCCGCCAACCCGTGCCG
GCCGCCGCCCCGGTCGAGGACATTGACGACGACATCCCGTTCTGA
ATGTCATTGAACAAAGTCATCCTTATCGGCCGCCTCGGACGCGATCCCGAAGTGCGCTATATGCCCAACGGCGAGGCAGT
GTGTAATTTCAGCGTCGCCACCAGCGAAACTTGGAACGACCGCAACGGCCAGCGCGTAGAGCGCACCGAATGGCACAACA
TCACGATGTACCGCAAACTGGCGGAAATTGCCGGGCAATACCTCAAAAAAGGCGGGCTGGTTTATCTGGAAGGCAGAATC
CAAAGCCGCAAATACCAAGGCAAAGACGGCATCGAACGCACCGCTTACGATATTGTCGCCAATGAAATGAAAATGTTGGG
CGGGCGCAATGAAAACAGCGGCGGCGCGCCTTACGATGAAGGTTACGGTCAGAGTCAGGAGGCTTACCAACGCCCCGCTC
AGCAAAGCCGGCAGCCCGCTCCCGACGCGCCGTCCCATCCCCAAGAAGCACCCGCCGCGCCGCGCCGCCAACCCGTGCCG
GCCGCCGCCCCGGTCGAGGACATTGACGACGACATCCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| ssb | Neisseria meningitidis MC58 |
98.851 |
100 |
0.989 |
| ssb | Vibrio cholerae strain A1552 |
47.778 |
100 |
0.494 |
| ssb | Glaesserella parasuis strain SC1401 |
44.505 |
100 |
0.466 |