Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   DBQ26_RS18590 Genome accession   NZ_CP028574
Coordinates   3519433..3520566 (+) Length   377 a.a.
NCBI ID   WP_005804749.1    Uniprot ID   A0A009MXX9
Organism   Acinetobacter pittii strain WCHAP005046     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3514433..3525566
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DBQ26_RS18565 (DBQ26_18565) - 3514689..3514895 (-) 207 WP_005804745.1 hypothetical protein -
  DBQ26_RS18570 (DBQ26_18570) oprC 3514949..3517063 (-) 2115 WP_017482415.1 TonB-dependent copper receptor -
  DBQ26_RS18575 (DBQ26_18575) - 3517136..3517561 (-) 426 WP_005804747.1 DUF2946 family protein -
  DBQ26_RS18580 (DBQ26_18580) def 3517605..3518135 (-) 531 WP_002114101.1 peptide deformylase -
  DBQ26_RS18585 (DBQ26_18585) tsaP 3518258..3519412 (+) 1155 WP_005804748.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  DBQ26_RS18590 (DBQ26_18590) dprA 3519433..3520566 (+) 1134 WP_005804749.1 DNA-processing protein DprA Machinery gene
  DBQ26_RS18595 (DBQ26_18595) yrdC 3520618..3521187 (+) 570 WP_005804750.1 L-threonylcarbamoyladenylate synthase -
  DBQ26_RS18600 (DBQ26_18600) - 3521580..3522500 (-) 921 WP_002114137.1 DMT family transporter -
  DBQ26_RS18605 (DBQ26_18605) - 3522605..3523258 (-) 654 WP_079377716.1 TetR/AcrR family transcriptional regulator -
  DBQ26_RS18610 (DBQ26_18610) nepI 3523394..3524608 (+) 1215 WP_005804752.1 MFS transporter -
  DBQ26_RS18615 (DBQ26_18615) yeaM 3524630..3525394 (+) 765 WP_005804753.1 AraC family transcriptional regulator -

Sequence


Protein


Download         Length: 377 a.a.        Molecular weight: 41804.31 Da        Isoelectric Point: 6.5419

>NTDB_id=285607 DBQ26_RS18590 WP_005804749.1 3519433..3520566(+) (dprA) [Acinetobacter pittii strain WCHAP005046]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIVDYFGSCEKAVQPAGLSQWRNLGLHANHLKRVDEFQTAQGQAQFEKLTEQI
QQYTDFILTADDSGYPAQLLPYTDHPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFYVSSGLAYG
IDEAAHQGASAHQRTIAVTGTGLDSTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTQWQSQQQNSTEEAVVSSTPEI
PEHLINLYQSLDWVGQNIDQLVLHHSQPVAELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1134 bp        

>NTDB_id=285607 DBQ26_RS18590 WP_005804749.1 3519433..3520566(+) (dprA) [Acinetobacter pittii strain WCHAP005046]
ATGCTTACTCAACTTTCTTCACACCATTACCACACGCTTAAAGTGTGGTATTTGGTGCAACACTCTTTAGTCAGCTTTAA
AAAAATTGTCGATTATTTTGGTAGCTGTGAAAAGGCGGTCCAACCTGCTGGATTATCTCAATGGCGCAATCTCGGGTTAC
ATGCTAATCATTTAAAACGCGTAGATGAATTTCAAACTGCTCAGGGTCAAGCTCAGTTTGAAAAACTAACTGAGCAGATC
CAGCAATATACCGACTTTATTTTAACGGCAGATGACTCAGGTTATCCCGCTCAGTTATTACCTTATACAGATCATCCACC
TATCATTTTTGGAAAAGGCCAAGCTCAAGCTTTGTTGCAACCACAAATTGCGATTGTAGGTAGCCGAAAACCAAGCCCAC
ATGGTCGTCAGGTTGCTTATGATTTTGCCTATTACTTAAGTGAAAAAGGTTTTTATGTGAGTAGTGGCTTGGCATATGGG
ATTGATGAAGCTGCTCACCAAGGAGCATCAGCACATCAACGTACAATTGCAGTAACAGGAACTGGTTTAGACAGTACCTA
CCCTGCTCAAAATAAAAAACTTGCAGAACATATTTTGGCTCAAAACGGCGCGATTATTACTGAATTTTTGCCTGGAACAC
CCCCATTACAACAGCATTTCCCACGTAGAAACCGAATTGTCAGCGGTTTGAGTTTAGGCGTGTTAGTGGTAGAAGCTACC
TTAAAAAGTGGTTCTCTCATCACTGCGAACAAAGCTGCCGAACAAGGTAAGACTGTATTTGCCATTCCTGGTCATATTTA
CAGTGAGTTTCATCAAGGTTGCCATCAACTTATTCGTGAGGGAGCAATTTTAGTCGATCATCCTGAACAAATTATTGAAG
ACCTTGCTTTACCCACTCAATGGCAAAGTCAGCAACAAAACTCCACCGAGGAGGCTGTAGTTTCTAGTACTCCAGAAATT
CCTGAGCATTTAATTAACCTTTATCAATCTTTAGACTGGGTCGGACAAAATATTGATCAGCTTGTTTTACATCACTCTCA
GCCTGTTGCAGAACTCACCTCTTCACTGATGGAACTAGAACTACTTGGTTTATGTATGCAACAATCAGGATTGTATTTAC
GTTGTCGTTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A009MXX9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

90.981

100

0.91

  dprA Acinetobacter baumannii strain A118

90.451

100

0.905

  dprA Acinetobacter baylyi ADP1

71.391

100

0.721

  dprA Vibrio cholerae strain A1552

43.844

88.329

0.387


Multiple sequence alignment