Detailed information NTG0284907

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: EGX82_RS04910
• Genome accession: NZ_CP033822
• Coordinates: 934620..935081 (-)
• Length: 153 a.a.
• NCBI ID: WP_001874060.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain FDAARGOS_512
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 929620..940081

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EGX82_RS04875 (EGX82_04875)	-	930174..930839 (-)	666	WP_000008111.1	type II CAAX endopeptidase family protein	-
EGX82_RS04880 (EGX82_04880)	-	930908..931363 (-)	456	WP_000905674.1	hypothetical protein	-
EGX82_RS04885 (EGX82_04885)	-	931404..931541 (-)	138	WP_001867090.1	hypothetical protein	-
EGX82_RS04890 (EGX82_04890)	-	931600..931806 (-)	207	WP_000798242.1	helix-turn-helix transcriptional regulator	-
EGX82_RS04895 (EGX82_04895)	-	931957..933150 (-)	1194	WP_000047535.1	acetate kinase	-
EGX82_RS04900 (EGX82_04900)	comGH	933182..934156 (-)	975	WP_001008570.1	class I SAM-dependent methyltransferase	Machinery gene
EGX82_RS04905 (EGX82_04905)	comGG	934271..934642 (-)	372	WP_000601104.1	competence type IV pilus minor pilin ComGG	Machinery gene
EGX82_RS04910 (EGX82_04910)	comGF	934620..935081 (-)	462	WP_001874060.1	competence type IV pilus minor pilin ComGF	Machinery gene
EGX82_RS04915 (EGX82_04915)	comGE	935035..935334 (-)	300	WP_001867089.1	competence type IV pilus minor pilin ComGE	Machinery gene
EGX82_RS04920 (EGX82_04920)	comGD	935306..935734 (-)	429	WP_000793381.1	competence type IV pilus minor pilin ComGD	Machinery gene
EGX82_RS04925 (EGX82_04925)	comGB	935731..936774 (-)	1044	WP_223295592.1	competence type IV pilus assembly protein ComGB	Machinery gene
EGX82_RS04930 (EGX82_04930)	comGA	936668..937639 (-)	972	WP_025197279.1	competence type IV pilus ATPase ComGA	Machinery gene
EGX82_RS04940 (EGX82_04940)	-	937812..938177 (-)	366	WP_000285373.1	DUF1033 family protein	-

Sequence

Protein

• Length: 153 a.a.
• Molecular weight: 17861.86 Da
• Isoelectric Point: 9.8392

>NTDB_id=284907 EGX82_RS04910 WP_001874060.1 934620..935081(-) (comGF) [Streptococcus agalactiae strain FDAARGOS_512]
MKVIRKFCTYQKLRVKAFTLLECLVALVTITGALLVYQGLTKLLAQQIVVMSSSSQSEWVLLTQQLNAEFEGAHLEYLRQ
NKLYLRKQDKIVTFGKSNKDDFRKTGYDGRGYQPMVYGLDNCQMSQTKSMVKLVFYFKDGLKRTFYYDFKEET

Nucleotide

• Length: 462 bp

>NTDB_id=284907 EGX82_RS04910 WP_001874060.1 934620..935081(-) (comGF) [Streptococcus agalactiae strain FDAARGOS_512]
TTGAAGGTAATAAGGAAATTTTGCACGTATCAAAAGTTAAGGGTTAAAGCATTTACGCTTTTAGAATGTTTGGTAGCATT
GGTTACAATCACAGGAGCTTTACTAGTTTATCAAGGACTGACAAAATTGTTGGCTCAACAGATAGTAGTGATGTCTTCTT
CCAGTCAGTCTGAATGGGTGTTATTAACTCAGCAACTAAATGCAGAATTCGAAGGCGCTCACTTGGAATATTTAAGACAG
AACAAACTTTATTTACGTAAGCAAGATAAGATTGTAACCTTTGGCAAATCTAATAAAGATGATTTCCGTAAGACAGGTTA
TGATGGTCGAGGTTATCAACCAATGGTTTATGGGTTAGACAATTGTCAAATGAGTCAAACCAAAAGTATGGTAAAACTTG
TTTTTTATTTTAAGGACGGGTTAAAAAGGACATTTTACTATGATTTTAAAGAAGAAACTTAA

Domains

Predicted by InterProScan.

• Putative Competence protein ComGF (ComGF) (49-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Streptococcus mutans UA159	47.887	92.81	0.444
comGF	Streptococcus mutans UA140	47.887	92.81	0.444
comGF/cglF	Streptococcus pneumoniae Rx1	43.165	90.85	0.392
comGF/cglF	Streptococcus pneumoniae D39	43.165	90.85	0.392
comGF/cglF	Streptococcus pneumoniae R6	43.165	90.85	0.392
comGF/cglF	Streptococcus pneumoniae TIGR4	43.165	90.85	0.392
comGF/cglF	Streptococcus mitis SK321	44.03	87.582	0.386
comGF/cglF	Streptococcus mitis NCTC 12261	43.284	87.582	0.379
comGF	Lactococcus lactis subsp. cremoris KW2	40.714	91.503	0.373