Detailed information NTG0284905

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: DA377_RS03780
• Genome accession: NZ_CP028439
• Coordinates: 709936..711099 (+)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain 8-2
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 704936..716099

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DA377_RS03760	-	705352..706548 (+)	1197	WP_003151381.1	glycosyltransferase	-
DA377_RS03765	-	706681..707757 (+)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
DA377_RS03770	-	707847..709061 (-)	1215	WP_003151383.1	LCP family protein	-
DA377_RS03775	-	709066..709713 (-)	648	WP_003151384.1	YigZ family protein	-
DA377_RS03780	degS	709936..711099 (+)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
DA377_RS03785	degU	711176..711865 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
DA377_RS03790	-	711963..712811 (+)	849	WP_003151387.1	DegV family protein	-
DA377_RS03795	comFA	712919..714304 (+)	1386	WP_003151388.1	DEAD/DEAH box helicase	Machinery gene
DA377_RS03800	-	714362..714646 (+)	285	WP_003151389.1	competence protein ComFB	-
DA377_RS03805	comFC	714652..715341 (+)	690	WP_198317760.1	phosphoribosyltransferase family protein	Machinery gene
DA377_RS03810	-	715415..715834 (+)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=284905 DA377_RS03780 WP_003151385.1 709936..711099(+) (degS) [Bacillus velezensis strain 8-2]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=284905 DA377_RS03780 WP_003151385.1 709936..711099(+) (degS) [Bacillus velezensis strain 8-2]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGACGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAGTCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948