Detailed information
Bioinformatically predicted
Overview
| Name | comGH | Type | Machinery gene |
| Locus tag | EGX82_RS04900 | Genome accession | NZ_CP033822 |
| Coordinates | 933182..934156 (-) | Length | 324 a.a. |
| NCBI ID | WP_001008570.1 | Uniprot ID | - |
| Organism | Streptococcus agalactiae strain FDAARGOS_512 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 928182..939156
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGX82_RS04865 (EGX82_04865) | pepA | 928246..929313 (+) | 1068 | WP_001281321.1 | glutamyl aminopeptidase | - |
| EGX82_RS04870 (EGX82_04870) | proC | 929383..930153 (+) | 771 | WP_001867096.1 | pyrroline-5-carboxylate reductase | - |
| EGX82_RS04875 (EGX82_04875) | - | 930174..930839 (-) | 666 | WP_000008111.1 | type II CAAX endopeptidase family protein | - |
| EGX82_RS04880 (EGX82_04880) | - | 930908..931363 (-) | 456 | WP_000905674.1 | hypothetical protein | - |
| EGX82_RS04885 (EGX82_04885) | - | 931404..931541 (-) | 138 | WP_001867090.1 | hypothetical protein | - |
| EGX82_RS04890 (EGX82_04890) | - | 931600..931806 (-) | 207 | WP_000798242.1 | helix-turn-helix transcriptional regulator | - |
| EGX82_RS04895 (EGX82_04895) | - | 931957..933150 (-) | 1194 | WP_000047535.1 | acetate kinase | - |
| EGX82_RS04900 (EGX82_04900) | comGH | 933182..934156 (-) | 975 | WP_001008570.1 | class I SAM-dependent methyltransferase | Machinery gene |
| EGX82_RS04905 (EGX82_04905) | comGG | 934271..934642 (-) | 372 | WP_000601104.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| EGX82_RS04910 (EGX82_04910) | comGF | 934620..935081 (-) | 462 | WP_001874060.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| EGX82_RS04915 (EGX82_04915) | comGE | 935035..935334 (-) | 300 | WP_001867089.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| EGX82_RS04920 (EGX82_04920) | comGD | 935306..935734 (-) | 429 | WP_000793381.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| EGX82_RS04925 (EGX82_04925) | comGB | 935731..936774 (-) | 1044 | WP_223295592.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| EGX82_RS04930 (EGX82_04930) | comGA | 936668..937639 (-) | 972 | WP_025197279.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| EGX82_RS04940 (EGX82_04940) | - | 937812..938177 (-) | 366 | WP_000285373.1 | DUF1033 family protein | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37100.99 Da Isoelectric Point: 4.4041
>NTDB_id=284905 EGX82_RS04900 WP_001008570.1 933182..934156(-) (comGH) [Streptococcus agalactiae strain FDAARGOS_512]
MNFEKIETAYELILENIQTIENQLKTHIYDALIEQNSYYLGSSCDLDIVVVNNQKLRQLDLSQEEWRRTFQFIFIKSAQT
EQLQANHQFTPDSIGFILLFLLEELTSQETVDVLEIGSGTGNLAQTLLNNSSKELNYMGIEVDDLLIDLSASIAEIIGSS
AQFIQEDAVRPQILKESDVIISDLPIGYYPNDDIAKRYAVSSSKEHTYAHHLLMEQSLKYLKKDGIAIFLAPENLLTSPQ
SDLLKEWLKGYADVIAVLTLPETIFGSRQNAKSIFVLKKQAEQKPETFVYPLTDLQNRENMANFIENFQKWSRENSHYSK
NMIE
MNFEKIETAYELILENIQTIENQLKTHIYDALIEQNSYYLGSSCDLDIVVVNNQKLRQLDLSQEEWRRTFQFIFIKSAQT
EQLQANHQFTPDSIGFILLFLLEELTSQETVDVLEIGSGTGNLAQTLLNNSSKELNYMGIEVDDLLIDLSASIAEIIGSS
AQFIQEDAVRPQILKESDVIISDLPIGYYPNDDIAKRYAVSSSKEHTYAHHLLMEQSLKYLKKDGIAIFLAPENLLTSPQ
SDLLKEWLKGYADVIAVLTLPETIFGSRQNAKSIFVLKKQAEQKPETFVYPLTDLQNRENMANFIENFQKWSRENSHYSK
NMIE
Nucleotide
Download Length: 975 bp
>NTDB_id=284905 EGX82_RS04900 WP_001008570.1 933182..934156(-) (comGH) [Streptococcus agalactiae strain FDAARGOS_512]
ATGAATTTTGAAAAAATTGAGACAGCCTATGAGCTGATTTTAGAAAATATCCAAACGATTGAGAACCAATTAAAAACTCA
TATTTATGATGCCTTAATTGAACAGAACTCTTATTACCTTGGTTCAAGTTGTGATTTAGATATTGTTGTGGTGAATAACC
AAAAATTACGTCAACTTGACTTAAGTCAAGAAGAATGGCGTCGCACTTTCCAGTTCATTTTTATCAAATCTGCGCAAACA
GAGCAATTACAAGCTAATCATCAGTTTACGCCAGATAGTATTGGTTTTATCTTGTTATTTCTTTTGGAAGAATTAACGAG
TCAAGAGACAGTGGATGTCTTGGAAATTGGAAGTGGAACTGGGAATTTAGCTCAGACTCTCCTCAATAACAGCTCGAAAG
AGTTAAATTATATGGGCATTGAAGTTGATGATCTTTTGATTGATCTATCAGCAAGCATTGCTGAAATTATAGGTTCTAGT
GCCCAATTTATCCAAGAGGATGCCGTTAGACCACAAATTTTGAAAGAAAGCGATGTAATCATTAGTGATTTACCAATTGG
CTATTATCCTAATGATGATATTGCTAAACGATATGCTGTATCAAGTTCTAAAGAGCACACCTATGCTCACCATCTATTGA
TGGAGCAATCTCTTAAATATTTGAAAAAAGATGGAATCGCTATATTTTTAGCACCCGAAAACCTTTTAACAAGTCCACAA
AGTGATTTGCTGAAGGAGTGGTTAAAAGGATATGCAGATGTCATTGCCGTTTTAACTCTACCAGAAACTATTTTTGGAAG
TCGTCAAAATGCGAAATCTATATTTGTTCTCAAGAAGCAAGCAGAACAAAAACCAGAAACCTTTGTATATCCGCTGACAG
ATTTGCAAAATCGTGAGAATATGGCAAACTTCATTGAAAATTTTCAAAAATGGAGCAGAGAAAATAGTCATTACTCAAAA
AATATGATAGAATAG
ATGAATTTTGAAAAAATTGAGACAGCCTATGAGCTGATTTTAGAAAATATCCAAACGATTGAGAACCAATTAAAAACTCA
TATTTATGATGCCTTAATTGAACAGAACTCTTATTACCTTGGTTCAAGTTGTGATTTAGATATTGTTGTGGTGAATAACC
AAAAATTACGTCAACTTGACTTAAGTCAAGAAGAATGGCGTCGCACTTTCCAGTTCATTTTTATCAAATCTGCGCAAACA
GAGCAATTACAAGCTAATCATCAGTTTACGCCAGATAGTATTGGTTTTATCTTGTTATTTCTTTTGGAAGAATTAACGAG
TCAAGAGACAGTGGATGTCTTGGAAATTGGAAGTGGAACTGGGAATTTAGCTCAGACTCTCCTCAATAACAGCTCGAAAG
AGTTAAATTATATGGGCATTGAAGTTGATGATCTTTTGATTGATCTATCAGCAAGCATTGCTGAAATTATAGGTTCTAGT
GCCCAATTTATCCAAGAGGATGCCGTTAGACCACAAATTTTGAAAGAAAGCGATGTAATCATTAGTGATTTACCAATTGG
CTATTATCCTAATGATGATATTGCTAAACGATATGCTGTATCAAGTTCTAAAGAGCACACCTATGCTCACCATCTATTGA
TGGAGCAATCTCTTAAATATTTGAAAAAAGATGGAATCGCTATATTTTTAGCACCCGAAAACCTTTTAACAAGTCCACAA
AGTGATTTGCTGAAGGAGTGGTTAAAAGGATATGCAGATGTCATTGCCGTTTTAACTCTACCAGAAACTATTTTTGGAAG
TCGTCAAAATGCGAAATCTATATTTGTTCTCAAGAAGCAAGCAGAACAAAAACCAGAAACCTTTGTATATCCGCTGACAG
ATTTGCAAAATCGTGAGAATATGGCAAACTTCATTGAAAATTTTCAAAAATGGAGCAGAGAAAATAGTCATTACTCAAAA
AATATGATAGAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGH | Streptococcus mutans UA159 |
66.984 |
97.222 |
0.651 |
| comGH | Streptococcus mutans UA140 |
66.984 |
97.222 |
0.651 |