Detailed information NTG0284567

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: C9I44_RS02595
• Genome accession: NZ_CP028386
• Coordinates: 494061..496271 (+)
• Length: 736 a.a.
• NCBI ID: WP_017370462.1
• Uniprot ID: -
• Organism: Lactococcus garvieae strain IBB3403
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 489061..501271

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C9I44_RS02570 (C9I44_02540)	-	489163..489345 (-)	183	WP_233239339.1	hypothetical protein	-
C9I44_RS02575 (C9I44_02545)	-	489523..489741 (+)	219	WP_233239340.1	hypothetical protein	-
C9I44_RS02580 (C9I44_02550)	-	490436..491992 (+)	1557	WP_004259192.1	ABC-F family ATP-binding cassette domain-containing protein	-
C9I44_RS02585 (C9I44_02555)	-	492158..493333 (+)	1176	WP_004259189.1	SLC13 family permease	-
C9I44_RS02590 (C9I44_02560)	-	493391..494041 (+)	651	WP_004259187.1	helix-hairpin-helix domain-containing protein	-
C9I44_RS02595 (C9I44_02565)	comEC	494061..496271 (+)	2211	WP_017370462.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
C9I44_RS02600 (C9I44_02570)	-	496426..497202 (+)	777	WP_004259182.1	alpha/beta hydrolase	-
C9I44_RS02605 (C9I44_02575)	-	497398..497613 (+)	216	WP_003135074.1	F0F1 ATP synthase subunit C	-
C9I44_RS02610 (C9I44_02580)	atpB	497668..498381 (+)	714	WP_004259176.1	F0F1 ATP synthase subunit A	-
C9I44_RS02615 (C9I44_02585)	atpF	498395..498901 (+)	507	WP_004259173.1	F0F1 ATP synthase subunit B	-
C9I44_RS02620 (C9I44_02590)	-	498916..499443 (+)	528	WP_014024339.1	F0F1 ATP synthase subunit delta	-
C9I44_RS02625 (C9I44_02595)	atpA	499509..501017 (+)	1509	WP_004259170.1	F0F1 ATP synthase subunit alpha	-

Sequence

Protein

• Length: 736 a.a.
• Molecular weight: 85388.16 Da
• Isoelectric Point: 9.7314

>NTDB_id=284567 C9I44_RS02595 WP_017370462.1 494061..496271(+) (comEC) [Lactococcus garvieae strain IBB3403]
MKQKFSLIYFVYLLVFVYFLIFSFSWPLLILSLFSFFIVFYRQYYSVLVLLLCFSLFLLMIKKETEVQERKQPEKISKIT
PYMDTLQVNGSRLSFRGEVNGNDFQAFYTLTSEKEKEYFKKLAVKGTFYFEGTLEIPEEQRNFSGFDYRKYLRTQGVYRL
LKIEKIHGFEEKQDFDLRLVRRKAILWAQEYFPSPMSSYMTGLLFGWLDKDFEEMGELYTSLGIIHLFALSGMQVNFFIE
LLRNILLRLGLSQKLVFFIQIPFSIFYAFLTGLSLSILRALLQKNIPLKNSSDRFSVTFLLLMVFSPYFLLTTGGQLTML
YSFLITFFSRKFKELKGLKKSLLDSTVLAVGVLPLLIFHFHSFQPLSIFLTLLFSLIFDFLLLPGLLFVFLLSLFGTALT
LFNPFFIVLESIVRWVGDLFDQPIVFGKPNLIFLLLLFMLSGLALDFYKKRNWNLSIIIILFLLFFFVKNPKHPSITMVD
VRQGDSILLQDSWNSQNILIDTGGRLKIRADEQWKEGIYKSNAENTLLPYLRARGVSKIDVLIVTHPDEDHIGDLESVAQ
KVPIKNVYVSASALEKKSFAKKLSRLNSQIHIVQEGDKLPIFNSYLWFLTTGVEGKSDNDNSLVTFGEFYGKKFLFTGDL
EEEGEVRLQEEYPHLEVDVLKVGHHGSKTSSKEAFLEAINPKLALISAGKNNRYKHPNQETLQQFAARGIKIYRTDQQGA
IRLLYKKGSWHIQTVK

Nucleotide

• Length: 2211 bp

>NTDB_id=284567 C9I44_RS02595 WP_017370462.1 494061..496271(+) (comEC) [Lactococcus garvieae strain IBB3403]
ATGAAACAAAAATTTTCGCTTATCTATTTCGTTTATCTCTTAGTCTTTGTTTATTTTCTTATTTTTAGTTTTTCATGGCC
TTTACTTATTCTTAGTCTCTTTAGTTTCTTCATCGTTTTTTATCGTCAATACTATAGTGTGTTAGTTCTTTTACTGTGCT
TTAGTTTATTCTTACTCATGATAAAAAAAGAAACGGAAGTACAAGAAAGAAAGCAACCAGAAAAAATTTCGAAAATTACC
CCTTATATGGATACTCTTCAAGTAAATGGAAGCAGGCTCAGTTTCAGAGGAGAAGTGAACGGCAACGACTTCCAAGCTTT
TTACACCTTGACCTCGGAAAAAGAAAAAGAATACTTCAAAAAACTTGCGGTGAAGGGGACTTTTTACTTTGAAGGCACTT
TGGAGATTCCAGAAGAGCAAAGAAACTTTTCAGGTTTTGATTACAGAAAGTATTTAAGGACTCAAGGGGTCTATCGTCTT
CTTAAAATAGAAAAAATTCATGGCTTTGAAGAAAAACAGGACTTTGATTTACGGCTGGTACGCCGAAAAGCCATTCTTTG
GGCTCAGGAATATTTCCCTTCTCCTATGTCGTCCTATATGACAGGGCTTCTTTTTGGGTGGTTGGATAAAGACTTTGAAG
AAATGGGGGAGCTTTACACCAGTCTTGGCATTATCCATTTATTTGCGCTGTCAGGCATGCAGGTGAATTTTTTTATTGAA
CTTCTCCGAAATATTTTACTGCGGCTTGGCTTATCACAGAAGTTAGTCTTTTTTATCCAAATTCCCTTTTCGATATTTTA
TGCATTTCTTACAGGCTTATCTCTTTCAATCTTACGCGCGCTTCTTCAAAAAAATATCCCCCTTAAAAATTCAAGCGATA
GATTTTCTGTCACTTTTCTTCTTTTAATGGTGTTCAGTCCTTATTTTCTGCTGACAACAGGAGGACAACTCACGATGCTT
TATTCTTTCTTAATCACATTTTTTTCACGAAAGTTCAAAGAACTAAAAGGATTAAAAAAATCGTTACTTGATTCTACCGT
CCTAGCTGTTGGGGTTCTTCCGCTTTTGATTTTTCACTTTCATAGTTTTCAGCCATTATCGATTTTCTTGACTTTATTAT
TTAGTCTGATTTTTGATTTTTTACTTCTGCCAGGTTTACTTTTTGTTTTTCTTCTTTCTTTATTCGGTACTGCTCTCACA
TTATTTAATCCTTTTTTTATTGTTTTAGAATCAATAGTAAGATGGGTGGGCGATTTATTTGACCAACCAATTGTCTTTGG
CAAACCCAACCTTATTTTTTTACTTTTACTTTTTATGCTGAGTGGACTTGCCCTTGATTTTTATAAAAAAAGAAACTGGA
ACTTGAGCATAATAATTATTCTTTTCTTGCTTTTTTTCTTTGTTAAGAATCCTAAACACCCAAGCATTACAATGGTAGAT
GTGAGACAAGGGGATAGTATTCTTTTACAAGACAGTTGGAACAGCCAAAACATCCTCATCGATACGGGCGGGAGATTAAA
AATAAGAGCTGATGAGCAGTGGAAGGAGGGAATCTATAAGAGCAATGCCGAAAATACACTTCTGCCTTATCTGAGAGCGC
GTGGCGTGAGTAAGATAGATGTTCTGATTGTGACACATCCAGATGAGGATCATATTGGAGACCTGGAGAGTGTAGCTCAG
AAAGTACCAATAAAAAATGTTTATGTGTCAGCTTCTGCATTGGAGAAGAAAAGCTTTGCTAAAAAACTCAGCCGTTTAAA
CAGTCAGATTCACATTGTGCAGGAGGGGGACAAGCTCCCGATCTTTAACAGTTATCTCTGGTTTTTAACGACAGGCGTTG
AAGGTAAAAGCGACAATGATAATTCTTTAGTGACATTTGGTGAATTTTATGGGAAGAAATTTCTTTTTACAGGTGACTTA
GAAGAAGAGGGAGAGGTGCGGCTCCAGGAAGAATATCCCCATTTAGAGGTGGATGTCCTAAAAGTTGGACATCATGGCAG
TAAAACTTCTTCAAAGGAAGCTTTTTTAGAAGCGATCAACCCTAAGCTCGCTCTTATTTCGGCTGGAAAGAATAATCGAT
ATAAACACCCAAATCAAGAAACGCTCCAACAATTCGCTGCACGAGGCATAAAAATTTATCGTACAGACCAGCAAGGGGCA
ATCCGTCTCCTTTATAAAAAAGGCAGTTGGCACATTCAAACAGTAAAGTAG

Domains

Predicted by InterProScan.

• Competence protein (Competence) (203-445)

• Metallo-beta-lactamase superfamily (Lactamase_B) (481-689)

• Domain of unknown function (DUF4131) (DUF4131) (25-166)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Lactococcus lactis subsp. cremoris KW2	52.66	99.592	0.524
comEC/celB	Streptococcus mitis SK321	44.98	100	0.457
comEC/celB	Streptococcus mitis NCTC 12261	43.548	100	0.44
comEC/celB	Streptococcus pneumoniae TIGR4	43.203	100	0.436
comEC/celB	Streptococcus pneumoniae Rx1	42.799	100	0.432
comEC/celB	Streptococcus pneumoniae D39	42.799	100	0.432
comEC/celB	Streptococcus pneumoniae R6	42.799	100	0.432