Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   C7M21_RS07995 Genome accession   NZ_CP028207
Coordinates   1571560..1573851 (+) Length   763 a.a.
NCBI ID   WP_160223246.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM102743     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1566560..1578851
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M21_RS07970 (C7M21_01595) - 1568145..1569368 (+) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  C7M21_RS07975 (C7M21_01596) - 1569375..1569716 (-) 342 WP_069006914.1 hypothetical protein -
  C7M21_RS07980 (C7M21_01597) degQ 1570181..1570321 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  C7M21_RS07985 (C7M21_01598) - 1570473..1571384 (+) 912 WP_081111611.1 polyprenyl synthetase family protein -
  C7M21_RS07990 (C7M21_01599) comX 1571384..1571548 (+) 165 WP_061581461.1 competence pheromone ComX -
  C7M21_RS07995 (C7M21_01600) comP 1571560..1573851 (+) 2292 WP_160223246.1 histidine kinase Regulator
  C7M21_RS08000 (C7M21_01601) comA 1573932..1574576 (+) 645 WP_003152052.1 response regulator transcription factor Regulator
  C7M21_RS08005 (C7M21_01602) - 1574598..1574981 (+) 384 WP_012118312.1 hotdog fold thioesterase -
  C7M21_RS08010 (C7M21_01603) mnhG 1575021..1575395 (-) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  C7M21_RS08015 (C7M21_01604) - 1575379..1575663 (-) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  C7M21_RS08020 (C7M21_01605) - 1575663..1576139 (-) 477 WP_160223245.1 Na+/H+ antiporter subunit E -
  C7M21_RS08025 (C7M21_01606) - 1576145..1577626 (-) 1482 WP_080130026.1 Na+/H+ antiporter subunit D -
  C7M21_RS08030 (C7M21_01607) - 1577619..1577960 (-) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  C7M21_RS08035 (C7M21_01608) - 1577960..1578391 (-) 432 WP_007408670.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 763 a.a.        Molecular weight: 88470.70 Da        Isoelectric Point: 7.3985

>NTDB_id=282713 C7M21_RS07995 WP_160223246.1 1571560..1573851(+) (comP) [Bacillus velezensis strain SRCM102743]
MKSKYNKVSVVLILLTLVYVIYLTYISTNNLLVGATISENKQGEIKIKDVEDFTMAYYAGVQKGDIVKNINHQNVKSINI
QMNKLKNVNSMVVDRNGHDIEIKLNLFNDRNFSTYLIPIIFYVVCLFCCFFIIKINEEKNLKSALVLIVFLLSASIAYIS
AGGSAKGDLLSRCIMLLTLITVPLNYLLFLYHYFKELGTVLFSKKVFVLYLFPTINILFELFRSRLSFGDFIPKFNLISF
FLLFLIVAYYFIVILRRNKDTDQAHIIKVLVVINILAFSPFLCLYLIPYVFFNDYYVSSFLTASFMLLIPFSLVYQFMSN
KIYNVDFILSKLKYYGFLALTPTIILVTTIELLREPEENFYNLKLTFLIYILMLAVFYYKEILDFRFKLKRVSERFNYQD
SIYKFTQLIRNSSSLNQVFGELKTTILEVTLTSKVYIFEVTYDGNVKAFDERDSSLIDDYQVLLNSVTVEIGKITEFNQG
FAMKVGERGDRSFVVLCLSKMNTPRLSREEISWLKTLSFYVNVSIENVMKIEELMNHLEDLKKQETNPVWLKKLMFTIEE
KQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGLVKA
VSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGCNQE
EGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKVDIEMEL

Nucleotide


Download         Length: 2292 bp        

>NTDB_id=282713 C7M21_RS07995 WP_160223246.1 1571560..1573851(+) (comP) [Bacillus velezensis strain SRCM102743]
ATGAAGTCCAAGTACAATAAGGTTTCAGTTGTCTTAATTCTGCTTACATTGGTATATGTCATTTATCTGACTTATATAAG
CACAAATAATCTTTTAGTCGGCGCCACAATTTCTGAAAATAAACAGGGCGAAATTAAAATAAAAGATGTAGAAGATTTTA
CAATGGCATATTACGCCGGAGTGCAAAAGGGAGATATAGTAAAGAATATTAACCACCAAAATGTAAAGTCAATTAATATT
CAAATGAATAAGCTGAAAAATGTAAACTCGATGGTCGTTGATAGAAACGGTCATGATATTGAGATTAAGCTCAATTTATT
TAATGATAGGAACTTCAGTACTTACTTAATACCGATAATTTTTTATGTAGTATGTTTATTTTGCTGCTTCTTCATCATTA
AAATAAATGAAGAAAAAAACTTGAAATCTGCTTTGGTGCTAATTGTATTTCTTTTGTCTGCTTCAATTGCATATATTAGT
GCTGGAGGATCGGCAAAAGGCGATTTGCTTAGCAGATGTATCATGTTGTTAACATTAATAACTGTACCTTTAAATTATCT
TCTGTTTCTTTATCATTACTTTAAAGAATTAGGTACAGTGCTTTTCAGCAAAAAAGTTTTCGTTTTGTATTTATTTCCAA
CTATAAATATATTATTTGAATTATTTCGGTCGCGATTATCTTTTGGTGATTTTATTCCAAAATTTAATTTGATTTCGTTT
TTTCTTCTTTTTTTGATTGTAGCATATTACTTTATTGTTATTTTGAGAAGAAACAAAGATACCGACCAGGCACATATTAT
AAAAGTGCTTGTAGTTATAAATATATTGGCATTTTCGCCTTTTTTATGTCTGTATCTTATACCGTATGTATTTTTTAATG
ATTATTATGTCTCTTCTTTCTTAACAGCATCATTTATGCTGCTGATACCTTTTTCACTTGTATATCAATTCATGTCGAAT
AAAATATATAACGTTGATTTTATCTTAAGTAAGTTAAAATATTACGGCTTTTTAGCGTTAACCCCAACTATAATTCTGGT
TACGACAATAGAGTTATTACGTGAGCCGGAAGAAAATTTTTACAATCTCAAACTGACATTTTTAATTTATATTTTAATGT
TAGCTGTTTTTTATTATAAAGAAATACTCGATTTCCGGTTTAAATTAAAAAGGGTTTCTGAAAGGTTCAATTACCAAGAC
AGTATTTATAAGTTTACCCAATTAATCAGAAACTCGTCTTCTTTAAATCAGGTTTTTGGAGAATTAAAAACCACCATTCT
CGAAGTAACTCTTACAAGTAAAGTGTATATATTTGAAGTTACGTATGATGGGAATGTAAAGGCATTTGACGAAAGAGATT
CAAGTTTGATAGATGATTATCAAGTGCTTTTAAATAGTGTTACTGTTGAGATAGGAAAAATAACGGAGTTTAATCAAGGT
TTCGCAATGAAAGTAGGAGAACGGGGAGATAGATCATTCGTTGTTCTCTGTCTGTCTAAGATGAATACGCCCCGTTTATC
ACGTGAAGAAATTTCTTGGTTAAAAACATTATCTTTTTACGTTAATGTTTCAATAGAAAACGTGATGAAAATCGAAGAAC
TTATGAATCATCTCGAAGATTTAAAGAAACAAGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACGATCGAGGAA
AAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAAGCGCCAGTGTGAGCT
GTTTCTGGCCGATTTTAAGAAAGAGGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGATGAATGAGCAGATGT
CGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTGGGTCTGGTCAAGGCG
GTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTACGGCGGCGCT
GGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCACAGGCGAATG
AGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGATGCAATCAGGAA
GAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGCGTCCGTGCGCTTGACGGACGGATGAAAAT
CGACACAAGTGAAGGAAACGGTTTTAAAGTAGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(563-632)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

53.896

100

0.544

Multiple sequence alignment