Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | LL14B4_RS11840 | Genome accession | NZ_CP028160 |
| Coordinates | 2374577..2374873 (-) | Length | 98 a.a. |
| NCBI ID | WP_033900709.1 | Uniprot ID | A0A0H1RKN4 |
| Organism | Lactococcus lactis subsp. lactis strain 14B4 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2369577..2379873
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LL14B4_RS11805 (LL14B4_11795) | - | 2369867..2370733 (+) | 867 | WP_033900713.1 | RluA family pseudouridine synthase | - |
| LL14B4_RS11810 (LL14B4_11800) | - | 2370772..2371581 (-) | 810 | WP_033900712.1 | metal ABC transporter permease | - |
| LL14B4_RS11815 (LL14B4_11805) | - | 2371574..2372311 (-) | 738 | WP_012898617.1 | metal ABC transporter ATP-binding protein | - |
| LL14B4_RS11820 (LL14B4_11810) | - | 2372488..2373330 (-) | 843 | WP_015427160.1 | metal ABC transporter substrate-binding protein | - |
| LL14B4_RS11825 (LL14B4_11815) | - | 2373327..2373764 (-) | 438 | WP_010906313.1 | zinc-dependent MarR family transcriptional regulator | - |
| LL14B4_RS11830 (LL14B4_11820) | comGG | 2373845..2374129 (-) | 285 | WP_017865155.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| LL14B4_RS11835 (LL14B4_11825) | comGF | 2374168..2374614 (-) | 447 | WP_058203710.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| LL14B4_RS11840 (LL14B4_11830) | comGE | 2374577..2374873 (-) | 297 | WP_033900709.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| LL14B4_RS11845 (LL14B4_11835) | comGD | 2374845..2375243 (-) | 399 | WP_233610962.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| LL14B4_RS11850 (LL14B4_11840) | comGC | 2375236..2375619 (-) | 384 | WP_080735951.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| LL14B4_RS11855 (LL14B4_11845) | comGB | 2375633..2376706 (-) | 1074 | WP_080735950.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| LL14B4_RS11860 (LL14B4_11850) | comGA | 2376600..2377538 (-) | 939 | WP_033900707.1 | competence type IV pilus ATPase ComGA | Machinery gene |
Sequence
Protein
Download Length: 98 a.a. Molecular weight: 11048.89 Da Isoelectric Point: 5.6957
>NTDB_id=281829 LL14B4_RS11840 WP_033900709.1 2374577..2374873(-) (comGE) [Lactococcus lactis subsp. lactis strain 14B4]
MENLKRKSVKAYLLLESLISIALLAFLVSFIVSSLVQVRQKDTEENQKIEALNVAQMAIESHLTELSINGSDIKIKENQN
LLIISNHGKEIMQLELQS
MENLKRKSVKAYLLLESLISIALLAFLVSFIVSSLVQVRQKDTEENQKIEALNVAQMAIESHLTELSINGSDIKIKENQN
LLIISNHGKEIMQLELQS
Nucleotide
Download Length: 297 bp
>NTDB_id=281829 LL14B4_RS11840 WP_033900709.1 2374577..2374873(-) (comGE) [Lactococcus lactis subsp. lactis strain 14B4]
GTGGAAAATTTAAAAAGAAAATCAGTTAAGGCATATTTGCTTTTGGAAAGTTTAATTAGTATAGCTCTACTCGCTTTTCT
AGTCAGCTTTATCGTAAGTTCTCTTGTGCAAGTAAGACAAAAAGATACGGAAGAAAATCAAAAGATTGAAGCTTTAAACG
TGGCACAAATGGCGATTGAAAGTCATTTAACAGAATTATCAATCAACGGTTCTGATATAAAGATAAAAGAAAACCAAAAT
TTACTGATTATTAGTAATCATGGAAAGGAAATTATGCAACTTGAACTTCAAAGTTAA
GTGGAAAATTTAAAAAGAAAATCAGTTAAGGCATATTTGCTTTTGGAAAGTTTAATTAGTATAGCTCTACTCGCTTTTCT
AGTCAGCTTTATCGTAAGTTCTCTTGTGCAAGTAAGACAAAAAGATACGGAAGAAAATCAAAAGATTGAAGCTTTAAACG
TGGCACAAATGGCGATTGAAAGTCATTTAACAGAATTATCAATCAACGGTTCTGATATAAAGATAAAAGAAAACCAAAAT
TTACTGATTATTAGTAATCATGGAAAGGAAATTATGCAACTTGAACTTCAAAGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Lactococcus lactis subsp. cremoris KW2 |
67.01 |
98.98 |
0.663 |