Detailed information
Bioinformatically predicted
Overview
| Name | comW | Type | Regulator |
| Locus tag | SPCG_RS00135 | Genome accession | NC_010582 |
| Coordinates | 22344..22580 (+) | Length | 78 a.a. |
| NCBI ID | WP_000939545.1 | Uniprot ID | A0A0H2ZMA7 |
| Organism | Streptococcus pneumoniae CGSP14 | ||
| Function | stabilization and activation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 17344..27580
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPCG_RS11750 | - | 20414..21260 (+) | 847 | Protein_14 | IS630 family transposase | - |
| SPCG_RS11755 | - | 21295..22079 (-) | 785 | Protein_15 | transposase | - |
| SPCG_RS00135 (SPCG_0018) | comW | 22344..22580 (+) | 237 | WP_000939545.1 | sigma(X)-activator ComW | Regulator |
| SPCG_RS00140 (SPCG_0019) | - | 22811..24097 (+) | 1287 | WP_001813655.1 | adenylosuccinate synthase | - |
| SPCG_RS00145 (SPCG_0020) | tadA | 24298..24765 (+) | 468 | WP_000291872.1 | tRNA adenosine(34) deaminase TadA | - |
| SPCG_RS00150 (SPCG_0021) | - | 24951..25394 (+) | 444 | WP_000701992.1 | dUTP diphosphatase | - |
| SPCG_RS00155 (SPCG_0022) | - | 25396..25911 (+) | 516 | WP_001828232.1 | histidine phosphatase family protein | - |
| SPCG_RS00160 (SPCG_0023) | radA | 25925..27286 (+) | 1362 | WP_073176637.1 | DNA repair protein RadA | Machinery gene |
Sequence
Protein
Download Length: 78 a.a. Molecular weight: 9658.13 Da Isoelectric Point: 6.7051
>NTDB_id=28166 SPCG_RS00135 WP_000939545.1 22344..22580(+) (comW) [Streptococcus pneumoniae CGSP14]
MLQKIYEQMANFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRKDFIVYHYRVAYRLYLEKLVMNRGFISC
MLQKIYEQMANFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRKDFIVYHYRVAYRLYLEKLVMNRGFISC
Nucleotide
Download Length: 237 bp
>NTDB_id=28166 SPCG_RS00135 WP_000939545.1 22344..22580(+) (comW) [Streptococcus pneumoniae CGSP14]
ATGTTACAAAAAATTTATGAGCAGATGGCTAATTTCTATGATAGTATTGAAGAAGAGTATGGTCCTACATTTGGTGATAA
TTTTGACTGGGAACATGTTCATTTTAAATTTTTAATTTATTATTTAGTGAGATATGGCATTGGTTGTCGTAAGGATTTTA
TCGTTTACCATTATCGTGTTGCTTATCGTTTGTATCTTGAAAAATTGGTAATGAATCGGGGTTTTATTTCTTGTTGA
ATGTTACAAAAAATTTATGAGCAGATGGCTAATTTCTATGATAGTATTGAAGAAGAGTATGGTCCTACATTTGGTGATAA
TTTTGACTGGGAACATGTTCATTTTAAATTTTTAATTTATTATTTAGTGAGATATGGCATTGGTTGTCGTAAGGATTTTA
TCGTTTACCATTATCGTGTTGCTTATCGTTTGTATCTTGAAAAATTGGTAATGAATCGGGGTTTTATTTCTTGTTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comW | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae TIGR4 |
100 |
100 |
1 |
| comW | Streptococcus mitis SK321 |
75.641 |
100 |
0.756 |
| comW | Streptococcus mitis NCTC 12261 |
75.325 |
98.718 |
0.744 |