Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   C5P47_RS03610 Genome accession   NZ_CP028140
Coordinates   695323..695517 (+) Length   64 a.a.
NCBI ID   WP_032464308.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NGAS979     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 690323..700517
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C5P47_RS03585 (C5P47_03565) - 691821..692420 (+) 600 WP_002990208.1 glycoside hydrolase family 73 protein -
  C5P47_RS03590 (C5P47_03570) - 692572..693279 (+) 708 WP_002990206.1 glycoside hydrolase family 73 protein -
  C5P47_RS03595 (C5P47_03575) - 693336..693653 (-) 318 Protein_639 IS3 family transposase -
  C5P47_RS03600 (C5P47_03580) - 693851..694216 (-) 366 WP_153276729.1 exotoxin beta-grasp domain-containing protein -
  C5P47_RS03605 (C5P47_03585) - 694236..695261 (-) 1026 WP_032464307.1 IdeS/Mac family cysteine endopeptidase -
  C5P47_RS03610 (C5P47_03590) prx 695323..695517 (+) 195 WP_032464308.1 hypothetical protein Regulator
  C5P47_RS03615 (C5P47_03595) - 695746..695922 (+) 177 WP_032464309.1 hypothetical protein -
  C5P47_RS03620 (C5P47_03600) - 696150..696530 (+) 381 WP_002985011.1 DUF1149 family protein -
  C5P47_RS03625 (C5P47_03605) - 696530..697378 (+) 849 WP_011054370.1 DegV family protein -
  C5P47_RS03630 (C5P47_03610) - 697503..698711 (+) 1209 WP_032464310.1 CCA tRNA nucleotidyltransferase -

Sequence

Protein


Download         Length: 64 a.a.        Molecular weight: 7640.82 Da        Isoelectric Point: 5.8375

>NTDB_id=281590 C5P47_RS03610 WP_032464308.1 695323..695517(+) (prx) [Streptococcus pyogenes strain NGAS979]
MQFFKIIFNKRKQAIDNGDITRDTVVVVLKNGRFFDDMLLHEEVSNRRAVIEEREEEALMKLDK

Nucleotide


Download         Length: 195 bp        

>NTDB_id=281590 C5P47_RS03610 WP_032464308.1 695323..695517(+) (prx) [Streptococcus pyogenes strain NGAS979]
TTGCAATTTTTTAAAATAATATTTAATAAACGTAAACAAGCGATTGACAATGGAGATATCACAAGAGACACAGTAGTGGT
TGTGCTTAAAAATGGACGGTTTTTTGATGATATGTTGCTGCATGAGGAAGTGAGCAATAGGAGAGCTGTGATAGAAGAAA
GAGAGGAAGAAGCGTTGATGAAATTAGACAAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

52.542

92.188

0.484
  prx Streptococcus pyogenes MGAS315

50.847

92.188

0.469
  prx Streptococcus pyogenes MGAS8232

45.763

92.188

0.422
  prx Streptococcus pyogenes MGAS315

44.068

92.188

0.406

Multiple sequence alignment