Detailed information NTG0281547

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: C4X49_RS16575
• Genome accession: NZ_CP028138
• Coordinates: 3369051..3369533 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046416.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain NCIMB 8209
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3364051..3374533

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C4X49_RS16540 (C4X49_16530)	-	3364158..3365192 (+)	1035	WP_130089833.1	lipase secretion chaperone	-
C4X49_RS16545 (C4X49_16535)	-	3365307..3366248 (+)	942	WP_086321537.1	lipase family alpha/beta hydrolase	-
C4X49_RS16550 (C4X49_16540)	rplS	3366301..3366669 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
C4X49_RS16555 (C4X49_16545)	trmD	3366877..3367617 (-)	741	WP_130089834.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
C4X49_RS16560 (C4X49_16550)	rimM	3367663..3368211 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
C4X49_RS16565 (C4X49_16555)	rpsP	3368231..3368482 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
C4X49_RS16570 (C4X49_16560)	pilE	3368629..3369054 (-)	426	WP_000788339.1	type IV pilin protein	Machinery gene
C4X49_RS16575 (C4X49_16565)	pilY2	3369051..3369533 (-)	483	WP_001046416.1	type IV pilin protein	Machinery gene
C4X49_RS16580 (C4X49_16570)	pilY1	3369546..3373400 (-)	3855	WP_024432273.1	PilC/PilY family type IV pilus protein	Machinery gene
C4X49_RS16585 (C4X49_16575)	pilX	3373412..3374230 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17533.80 Da
• Isoelectric Point: 8.4817

>NTDB_id=281547 C4X49_RS16575 WP_001046416.1 3369051..3369533(-) (pilY2) [Acinetobacter baumannii strain NCIMB 8209]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ

Nucleotide

• Length: 483 bp

>NTDB_id=281547 C4X49_RS16575 WP_001046416.1 3369051..3369533(-) (pilY2) [Acinetobacter baumannii strain NCIMB 8209]
ATGAATAAATACTCTATTCTACGGTTCAATCAGGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	95	100	0.95
comE	Acinetobacter baylyi ADP1	41.279	100	0.444