Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | C4X49_RS16570 | Genome accession | NZ_CP028138 |
| Coordinates | 3368629..3369054 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788339.1 | Uniprot ID | A0A009QPU5 |
| Organism | Acinetobacter baumannii strain NCIMB 8209 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3363629..3374054
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C4X49_RS16540 (C4X49_16530) | - | 3364158..3365192 (+) | 1035 | WP_130089833.1 | lipase secretion chaperone | - |
| C4X49_RS16545 (C4X49_16535) | - | 3365307..3366248 (+) | 942 | WP_086321537.1 | lipase family alpha/beta hydrolase | - |
| C4X49_RS16550 (C4X49_16540) | rplS | 3366301..3366669 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| C4X49_RS16555 (C4X49_16545) | trmD | 3366877..3367617 (-) | 741 | WP_130089834.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| C4X49_RS16560 (C4X49_16550) | rimM | 3367663..3368211 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| C4X49_RS16565 (C4X49_16555) | rpsP | 3368231..3368482 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| C4X49_RS16570 (C4X49_16560) | pilE | 3368629..3369054 (-) | 426 | WP_000788339.1 | type IV pilin protein | Machinery gene |
| C4X49_RS16575 (C4X49_16565) | pilY2 | 3369051..3369533 (-) | 483 | WP_001046416.1 | type IV pilin protein | Machinery gene |
| C4X49_RS16580 (C4X49_16570) | pilY1 | 3369546..3373400 (-) | 3855 | WP_024432273.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15210.39 Da Isoelectric Point: 7.8144
>NTDB_id=281546 C4X49_RS16570 WP_000788339.1 3368629..3369054(-) (pilE) [Acinetobacter baumannii strain NCIMB 8209]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKMVNNRYPSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKMVNNRYPSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=281546 C4X49_RS16570 WP_000788339.1 3368629..3369054(-) (pilE) [Acinetobacter baumannii strain NCIMB 8209]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCCTCAAATGCAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCCTCAAATGCAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
97.872 |
100 |
0.979 |
| comF | Acinetobacter baylyi ADP1 |
51.429 |
99.291 |
0.511 |