Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | DNO_RS03295 | Genome accession | NC_009446 |
| Coordinates | 718972..720045 (+) | Length | 357 a.a. |
| NCBI ID | WP_012031008.1 | Uniprot ID | A5EV68 |
| Organism | Dichelobacter nodosus VCS1703A | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 713972..725045
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DNO_RS03270 (DNO_0670) | serC | 714284..715360 (-) | 1077 | WP_012031003.1 | 3-phosphoserine/phosphohydroxythreonine transaminase | - |
| DNO_RS03275 (DNO_0671) | - | 715365..715562 (-) | 198 | WP_012031004.1 | hypothetical protein | - |
| DNO_RS03280 (DNO_0672) | mnmG | 715559..717457 (-) | 1899 | WP_012031005.1 | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG | - |
| DNO_RS03285 (DNO_0673) | - | 717482..718000 (-) | 519 | WP_012031006.1 | YggT family protein | - |
| DNO_RS03290 (DNO_0674) | proC | 718000..718857 (-) | 858 | WP_012031007.1 | pyrroline-5-carboxylate reductase | - |
| DNO_RS03295 (DNO_0675) | pilT | 718972..720045 (+) | 1074 | WP_012031008.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| DNO_RS03300 (DNO_0676) | - | 720058..721278 (+) | 1221 | WP_012031009.1 | PilT/PilU family type 4a pilus ATPase | - |
| DNO_RS03305 (DNO_0677) | parE | 721284..723191 (+) | 1908 | WP_012031010.1 | DNA topoisomerase IV subunit B | - |
Sequence
Protein
Download Length: 357 a.a. Molecular weight: 39721.66 Da Isoelectric Point: 6.8371
>NTDB_id=28051 DNO_RS03295 WP_012031008.1 718972..720045(+) (pilT) [Dichelobacter nodosus VCS1703A]
MTDESLESEKKELKLDDLLRFAQKQGASDLHLSCGVPPMIRIDGDVRRLNLPPLQNQQMRDMIFGIMTDAQMKSFEEKWE
ADFSTEIRGVSRFRVNVFQQNRGMGIVFRTIPSKVLSLEDLKAPAKFVDIIDVPRGLVLVTGPTGSGKSTTLAAMIDHIN
NNRHEHILTVEDPIEFVHESKKCLVNQREVHRDTQSFSNALRAALREDPDIILVGELRDLETIRLALTAAETGHLVFGTL
HTSSAAKTIDRIIDVFPGEEKQLVRSMLSESLRAVIAQTLLKKIGGGRVAAHEVLVGTSAVKNLIREDKVAQIYSTIQTG
SQYGMQTLDQALSALVKEGKVDRMLAASKAHDKDNFM
MTDESLESEKKELKLDDLLRFAQKQGASDLHLSCGVPPMIRIDGDVRRLNLPPLQNQQMRDMIFGIMTDAQMKSFEEKWE
ADFSTEIRGVSRFRVNVFQQNRGMGIVFRTIPSKVLSLEDLKAPAKFVDIIDVPRGLVLVTGPTGSGKSTTLAAMIDHIN
NNRHEHILTVEDPIEFVHESKKCLVNQREVHRDTQSFSNALRAALREDPDIILVGELRDLETIRLALTAAETGHLVFGTL
HTSSAAKTIDRIIDVFPGEEKQLVRSMLSESLRAVIAQTLLKKIGGGRVAAHEVLVGTSAVKNLIREDKVAQIYSTIQTG
SQYGMQTLDQALSALVKEGKVDRMLAASKAHDKDNFM
Nucleotide
Download Length: 1074 bp
>NTDB_id=28051 DNO_RS03295 WP_012031008.1 718972..720045(+) (pilT) [Dichelobacter nodosus VCS1703A]
ATGACGGATGAAAGCTTAGAAAGTGAAAAAAAAGAACTTAAACTAGACGATTTATTACGATTTGCTCAAAAACAGGGCGC
GTCTGACTTGCATTTGAGTTGTGGTGTTCCGCCGATGATTCGGATAGACGGGGACGTGAGACGGCTCAACTTGCCGCCGC
TACAAAACCAACAAATGCGCGATATGATTTTCGGCATTATGACGGACGCGCAAATGAAAAGTTTTGAAGAAAAATGGGAA
GCGGACTTTTCTACGGAAATTCGCGGTGTTTCTCGATTTCGGGTTAACGTTTTCCAACAAAACCGCGGCATGGGGATCGT
GTTCCGGACGATTCCGAGTAAAGTTTTGTCGCTGGAAGATTTAAAAGCGCCGGCAAAATTCGTAGATATTATTGACGTTC
CGCGCGGATTAGTTTTAGTTACGGGGCCGACCGGTTCCGGAAAATCTACCACTTTGGCAGCGATGATCGACCATATCAAT
AATAATCGCCATGAACATATTCTAACGGTTGAAGACCCGATCGAATTCGTGCATGAATCTAAAAAATGTTTGGTCAATCA
ACGGGAAGTGCACCGCGATACGCAAAGTTTCTCCAATGCGCTGCGGGCAGCTTTGCGGGAAGACCCTGATATTATTCTCG
TTGGGGAGTTGCGGGACTTGGAAACTATTCGTTTGGCATTGACTGCCGCTGAAACAGGGCACTTGGTTTTCGGTACTTTG
CACACCAGTTCTGCAGCAAAAACAATTGACCGGATTATCGACGTTTTCCCTGGGGAAGAAAAACAACTCGTGCGTTCCAT
GCTTTCGGAATCATTGCGCGCGGTTATTGCGCAAACTTTGTTGAAAAAAATTGGCGGCGGACGGGTGGCAGCGCATGAAG
TGTTAGTGGGGACTTCGGCGGTGAAAAACTTAATTCGGGAAGATAAAGTTGCCCAAATTTATTCTACAATTCAAACCGGC
TCACAATACGGCATGCAAACGCTCGATCAGGCTTTATCTGCTTTAGTGAAAGAAGGAAAAGTTGATCGCATGTTGGCAGC
TTCAAAAGCCCACGATAAAGACAATTTTATGTAA
ATGACGGATGAAAGCTTAGAAAGTGAAAAAAAAGAACTTAAACTAGACGATTTATTACGATTTGCTCAAAAACAGGGCGC
GTCTGACTTGCATTTGAGTTGTGGTGTTCCGCCGATGATTCGGATAGACGGGGACGTGAGACGGCTCAACTTGCCGCCGC
TACAAAACCAACAAATGCGCGATATGATTTTCGGCATTATGACGGACGCGCAAATGAAAAGTTTTGAAGAAAAATGGGAA
GCGGACTTTTCTACGGAAATTCGCGGTGTTTCTCGATTTCGGGTTAACGTTTTCCAACAAAACCGCGGCATGGGGATCGT
GTTCCGGACGATTCCGAGTAAAGTTTTGTCGCTGGAAGATTTAAAAGCGCCGGCAAAATTCGTAGATATTATTGACGTTC
CGCGCGGATTAGTTTTAGTTACGGGGCCGACCGGTTCCGGAAAATCTACCACTTTGGCAGCGATGATCGACCATATCAAT
AATAATCGCCATGAACATATTCTAACGGTTGAAGACCCGATCGAATTCGTGCATGAATCTAAAAAATGTTTGGTCAATCA
ACGGGAAGTGCACCGCGATACGCAAAGTTTCTCCAATGCGCTGCGGGCAGCTTTGCGGGAAGACCCTGATATTATTCTCG
TTGGGGAGTTGCGGGACTTGGAAACTATTCGTTTGGCATTGACTGCCGCTGAAACAGGGCACTTGGTTTTCGGTACTTTG
CACACCAGTTCTGCAGCAAAAACAATTGACCGGATTATCGACGTTTTCCCTGGGGAAGAAAAACAACTCGTGCGTTCCAT
GCTTTCGGAATCATTGCGCGCGGTTATTGCGCAAACTTTGTTGAAAAAAATTGGCGGCGGACGGGTGGCAGCGCATGAAG
TGTTAGTGGGGACTTCGGCGGTGAAAAACTTAATTCGGGAAGATAAAGTTGCCCAAATTTATTCTACAATTCAAACCGGC
TCACAATACGGCATGCAAACGCTCGATCAGGCTTTATCTGCTTTAGTGAAAGAAGGAAAAGTTGATCGCATGTTGGCAGC
TTCAAAAGCCCACGATAAAGACAATTTTATGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas stutzeri DSM 10701 |
71.221 |
96.359 |
0.686 |
| pilT | Pseudomonas aeruginosa PAK |
71.221 |
96.359 |
0.686 |
| pilT | Acinetobacter baumannii D1279779 |
68.116 |
96.639 |
0.658 |
| pilT | Acinetobacter baumannii strain A118 |
68.116 |
96.639 |
0.658 |
| pilT | Acinetobacter nosocomialis M2 |
68.116 |
96.639 |
0.658 |
| pilT | Acinetobacter baylyi ADP1 |
67.733 |
96.359 |
0.653 |
| pilT | Legionella pneumophila strain Lp02 |
65.988 |
96.359 |
0.636 |
| pilT | Legionella pneumophila strain ERS1305867 |
65.988 |
96.359 |
0.636 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
65.579 |
94.398 |
0.619 |
| pilT | Vibrio cholerae strain A1552 |
65.579 |
94.398 |
0.619 |
| pilT | Neisseria meningitidis 8013 |
61.159 |
96.639 |
0.591 |
| pilT | Neisseria gonorrhoeae MS11 |
60.87 |
96.639 |
0.588 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
51.84 |
91.317 |
0.473 |
| pilU | Vibrio cholerae strain A1552 |
42.727 |
92.437 |
0.395 |
| pilU | Pseudomonas stutzeri DSM 10701 |
40.988 |
96.359 |
0.395 |
| pilU | Acinetobacter baylyi ADP1 |
39.595 |
96.919 |
0.384 |