Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   D9C16_RS13560 Genome accession   NZ_CP032861
Coordinates   2487339..2488166 (-) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis subsp. subtilis strain N1-1     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 2482339..2493166
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C16_RS13535 (D9C16_13535) abrB 2484685..2484975 (+) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  D9C16_RS13540 (D9C16_13540) rsmI 2485024..2485902 (-) 879 WP_003243457.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  D9C16_RS13545 (D9C16_13545) yazA 2485877..2486176 (-) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  D9C16_RS13550 (D9C16_13550) trmNF 2486163..2486906 (-) 744 WP_003244526.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  D9C16_RS13555 (D9C16_13555) yabA 2486965..2487324 (-) 360 WP_003218308.1 replication initiation-control protein YabA -
  D9C16_RS13560 (D9C16_13560) yaaT 2487339..2488166 (-) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  D9C16_RS13565 (D9C16_13565) holB 2488169..2489158 (-) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  D9C16_RS13570 (D9C16_13570) yaaR 2489170..2489610 (-) 441 WP_009966249.1 YaaR family protein -
  D9C16_RS13575 (D9C16_13575) darA 2489623..2489952 (-) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  D9C16_RS13580 (D9C16_13580) tmk 2490026..2490664 (-) 639 WP_003226776.1 dTMP kinase -
  D9C16_RS13585 (D9C16_13585) efpO 2490661..2492103 (-) 1443 WP_014478592.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=279657 D9C16_RS13560 WP_003226767.1 2487339..2488166(-) (yaaT) [Bacillus subtilis subsp. subtilis strain N1-1]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=279657 D9C16_RS13560 WP_003226767.1 2487339..2488166(-) (yaaT) [Bacillus subtilis subsp. subtilis strain N1-1]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996

Multiple sequence alignment