Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | PST_RS04155 | Genome accession | NC_009434 |
| Coordinates | 912592..913083 (+) | Length | 163 a.a. |
| NCBI ID | WP_003281797.1 | Uniprot ID | A0A210XTT8 |
| Organism | Stutzerimonas stutzeri A1501 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 907592..918083
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PST_RS04145 (PST_0812) | uvrA | 908090..910927 (-) | 2838 | WP_041755350.1 | excinuclease ABC subunit UvrA | - |
| PST_RS04150 (PST_0813) | - | 911060..912427 (+) | 1368 | WP_011912003.1 | MFS transporter | - |
| PST_RS04155 (PST_0814) | ssb | 912592..913083 (+) | 492 | WP_003281797.1 | single-stranded DNA-binding protein | Machinery gene |
| PST_RS04160 (PST_0815) | - | 913094..913978 (+) | 885 | WP_017244908.1 | sugar nucleotide-binding protein | - |
| PST_RS04165 (PST_0816) | - | 913971..914900 (+) | 930 | WP_011912006.1 | NAD-dependent epimerase/dehydratase family protein | - |
| PST_RS04170 (PST_0817) | - | 914970..915647 (-) | 678 | WP_011912007.1 | OmpW/AlkL family protein | - |
| PST_RS04175 (PST_0818) | - | 915832..916617 (+) | 786 | WP_011912008.1 | DUF3450 domain-containing protein | - |
| PST_RS04180 (PST_0819) | - | 916614..917960 (+) | 1347 | WP_011912009.1 | MotA/TolQ/ExbB proton channel family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 18314.38 Da Isoelectric Point: 5.9492
>NTDB_id=27961 PST_RS04155 WP_003281797.1 912592..913083(+) (ssb) [Stutzerimonas stutzeri A1501]
MARGVNKVILIGNVGGDPETRYMPNGNAVTNITLATTDSWKDKQTGQLQERTEWHRVVLFGKVAEIAGEYLRKGSQCYIE
GRLQTREWEKDGVKRYTTEIVVDMNGTMQLLGGRGGSSDDAPRQPRPQREPQQAPRQQAQPQQPAARQQPAPDYDSFDDD
IPF
MARGVNKVILIGNVGGDPETRYMPNGNAVTNITLATTDSWKDKQTGQLQERTEWHRVVLFGKVAEIAGEYLRKGSQCYIE
GRLQTREWEKDGVKRYTTEIVVDMNGTMQLLGGRGGSSDDAPRQPRPQREPQQAPRQQAQPQQPAARQQPAPDYDSFDDD
IPF
Nucleotide
Download Length: 492 bp
>NTDB_id=27961 PST_RS04155 WP_003281797.1 912592..913083(+) (ssb) [Stutzerimonas stutzeri A1501]
ATGGCCAGAGGGGTGAATAAAGTCATCTTGATCGGCAATGTCGGCGGCGACCCGGAAACCCGCTACATGCCCAATGGCAA
TGCGGTGACCAACATCACGCTGGCAACCACCGACAGCTGGAAGGACAAGCAGACCGGTCAGCTTCAGGAGCGCACCGAGT
GGCACCGTGTGGTGCTGTTCGGCAAGGTCGCCGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCGCAGTGCTACATCGAA
GGCCGCCTGCAGACTCGCGAGTGGGAGAAGGATGGCGTCAAGCGCTACACCACCGAAATCGTCGTCGACATGAATGGCAC
CATGCAGCTGCTCGGCGGCCGTGGCGGCAGTTCCGATGACGCGCCACGTCAGCCGCGCCCGCAGCGCGAGCCGCAACAGG
CTCCGCGTCAGCAGGCTCAGCCGCAGCAGCCGGCCGCACGGCAGCAGCCGGCGCCGGACTATGACAGCTTCGATGACGAC
ATCCCCTTCTAG
ATGGCCAGAGGGGTGAATAAAGTCATCTTGATCGGCAATGTCGGCGGCGACCCGGAAACCCGCTACATGCCCAATGGCAA
TGCGGTGACCAACATCACGCTGGCAACCACCGACAGCTGGAAGGACAAGCAGACCGGTCAGCTTCAGGAGCGCACCGAGT
GGCACCGTGTGGTGCTGTTCGGCAAGGTCGCCGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCGCAGTGCTACATCGAA
GGCCGCCTGCAGACTCGCGAGTGGGAGAAGGATGGCGTCAAGCGCTACACCACCGAAATCGTCGTCGACATGAATGGCAC
CATGCAGCTGCTCGGCGGCCGTGGCGGCAGTTCCGATGACGCGCCACGTCAGCCGCGCCCGCAGCGCGAGCCGCAACAGG
CTCCGCGTCAGCAGGCTCAGCCGCAGCAGCCGGCCGCACGGCAGCAGCCGGCGCCGGACTATGACAGCTTCGATGACGAC
ATCCCCTTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
56.571 |
100 |
0.607 |
| ssb | Neisseria gonorrhoeae MS11 |
47.727 |
100 |
0.515 |
| ssb | Glaesserella parasuis strain SC1401 |
45.355 |
100 |
0.509 |
| ssb | Neisseria meningitidis MC58 |
46.591 |
100 |
0.503 |