Detailed information NTG0278765

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: C6Y50_RS03670
• Genome accession: NZ_CP027664
• Coordinates: 769017..770354 (+)
• Length: 445 a.a.
• NCBI ID: WP_026006503.1
• Uniprot ID: A0A137YGV3
• Organism: Stutzerimonas stutzeri strain 1W1-1A
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 764017..775354

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C6Y50_RS03645 (C6Y50_03645)	pgeF	764047..764784 (-)	738	WP_045159695.1	peptidoglycan editing factor PgeF	-
C6Y50_RS03650 (C6Y50_03650)	rluD	764781..765755 (-)	975	WP_011914661.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
C6Y50_RS03655 (C6Y50_03655)	-	765960..766949 (+)	990	WP_013984073.1	outer membrane protein assembly factor BamD	-
C6Y50_RS03660 (C6Y50_03660)	-	767071..767304 (+)	234	WP_013984074.1	PP0621 family protein	-
C6Y50_RS03665 (C6Y50_03665)	pilS	767294..768886 (+)	1593	WP_017244514.1	sensor histidine kinase	Regulator
C6Y50_RS03670 (C6Y50_03670)	pilR	769017..770354 (+)	1338	WP_026006503.1	sigma-54-dependent transcriptional regulator	Regulator
C6Y50_RS03675 (C6Y50_03675)	-	770398..771456 (-)	1059	WP_011914666.1	DUF2333 family protein	-
C6Y50_RS03680 (C6Y50_03680)	-	771674..773269 (+)	1596	WP_014597755.1	response regulator	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49558.09 Da
• Isoelectric Point: 6.4140

>NTDB_id=278765 C6Y50_RS03670 WP_026006503.1 769017..770354(+) (pilR) [Stutzerimonas stutzeri strain 1W1-1A]
MTARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEARELLAREHYDLCLTDMRLPDGSGLELVQHIQQQYPQLPVA
MITAYGSLDTAIGALKAGAFDFLTKPVDLNRLRELVSTALRLRAPAAEAPVDSRLLGSSPPMKTLRKQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRSEKPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGAQEVMVDVRILCATHKDLASEVAAGRFRQDLYYRLNVIELRVPPLRERREDIGLLADVM
LRRLAQECGEATARLHPDALAKLENYRFPGNVRELENMLERAYTLCEGDEIKAGDLRLADSPGLPENGEASLAQIDNLED
HLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

Nucleotide

• Length: 1338 bp

>NTDB_id=278765 C6Y50_RS03670 WP_026006503.1 769017..770354(+) (pilR) [Stutzerimonas stutzeri strain 1W1-1A]
ATGACCGCGCGCCAGAAAGCCCTGATCATCGACGACGAGCCGGACATCCGCGAGCTGCTGGAGATCACCCTCGGCCGCAT
GAAGCTCGATACCCGCAGCGCACGCAACCTCAAGGAGGCGCGCGAGCTGCTGGCACGCGAGCACTACGACCTGTGCCTGA
CCGATATGCGCCTGCCCGACGGCAGTGGCCTTGAGCTGGTCCAGCACATCCAGCAACAGTACCCACAACTGCCCGTGGCG
ATGATCACCGCCTATGGCAGCCTGGATACCGCCATCGGTGCACTCAAGGCCGGTGCGTTCGACTTCCTCACCAAACCGGT
GGACCTGAACCGCCTGCGCGAGCTGGTCAGTACCGCCCTGCGCCTGCGCGCGCCCGCAGCCGAAGCGCCGGTGGACAGTC
GCCTGCTGGGCAGCTCGCCGCCGATGAAAACCTTGCGCAAGCAGATCGGCAAGCTCGCCCGCAGCCAGGCACCCGTCTAC
ATCAGCGGCGAGTCGGGCAGCGGCAAGGAACTGGTGGCACGCCTGATTCACGAGCAGGGCCCGCGCAGCGAAAAGCCATT
CGTGCCGGTCAACTGCGGTGCCATTCCGTCGGAGCTGATGGAAAGCGAGTTCTTCGGCCACAAGAAAGGCAGCTTCAGCG
GCGCCATCGAGGACAAGCCCGGCCTGTTCCAGGCCGCCAACGGTGGCACGCTGTTTCTCGACGAGGTGGCGGACCTGCCG
CTGCCGATGCAGGTCAAGCTGCTGCGCGCCATCCAGGAAAAGGCCGTGCGTGCCGTTGGCGGTGCGCAGGAAGTGATGGT
CGATGTACGCATCCTCTGCGCCACCCACAAGGATCTCGCCAGCGAGGTCGCCGCAGGCCGTTTTCGCCAGGATCTCTACT
ACCGCCTGAACGTCATCGAACTGCGTGTACCGCCACTACGCGAACGCCGCGAAGACATCGGCCTGCTCGCCGATGTCATG
CTGCGCCGCCTGGCGCAGGAATGCGGCGAGGCCACGGCCCGCCTGCATCCCGATGCCCTGGCCAAGCTGGAGAACTATCG
CTTTCCGGGCAACGTCCGCGAGCTGGAGAATATGCTCGAACGCGCCTACACCCTGTGCGAAGGCGACGAGATCAAGGCTG
GCGACCTGCGCCTGGCGGATAGCCCAGGCCTGCCGGAAAACGGCGAAGCCAGCCTGGCGCAGATCGACAACCTGGAGGAC
CACCTGGAGGAGATCGAGCGCAAGCTGATCATGCAGGCCCTCGAAGAAACACGCTGGAACCGCACCGCGGCTGCCCAGCG
ACTGGGGCTGACCTTCCGCTCGATGCGCTACCGTCTGAAGAAACTCGGACTGGACTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-116)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

• Sigma-54 interaction domain (Sigma54_activat) (136-301)

3D structure

• AlphaFold DB: A0A137YGV3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	85.586	99.775	0.854
pilR	Acinetobacter baumannii strain A118	50.545	100	0.521
luxO	Vibrio cholerae strain A1552	38.117	100	0.382