Detailed information NTG0278470

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: AM480_RS04545
• Genome accession: NZ_CP027611
• Coordinates: 911773..912255 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046417.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain AR_0101
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 906773..917255

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AM480_RS04510 (AM480_04510)	-	906880..907914 (+)	1035	WP_001189451.1	lipase secretion chaperone	-
AM480_RS04515 (AM480_04515)	-	908029..908970 (+)	942	WP_085943440.1	lipase family alpha/beta hydrolase	-
AM480_RS04520 (AM480_04520)	rplS	909023..909391 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
AM480_RS04525 (AM480_04525)	trmD	909599..910339 (-)	741	WP_000464596.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
AM480_RS04530 (AM480_04530)	rimM	910385..910933 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
AM480_RS04535 (AM480_04535)	rpsP	910953..911204 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
AM480_RS04540 (AM480_04540)	pilE	911351..911776 (-)	426	WP_000788342.1	type IV pilin protein	Machinery gene
AM480_RS04545 (AM480_04545)	pilY2	911773..912255 (-)	483	WP_001046417.1	type IV pilin protein	Machinery gene
AM480_RS04550 (AM480_04550)	pilY1	912268..916122 (-)	3855	WP_213065396.1	PilC/PilY family type IV pilus protein	Machinery gene
AM480_RS04555 (AM480_04555)	pilX	916134..916952 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17516.77 Da
• Isoelectric Point: 8.4817

>NTDB_id=278470 AM480_RS04545 WP_001046417.1 911773..912255(-) (pilY2) [Acinetobacter baumannii strain AR_0101]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=278470 AM480_RS04545 WP_001046417.1 911773..912255(-) (pilY2) [Acinetobacter baumannii strain AR_0101]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTGGAACAGCATAAATCAAGAAATTTTACTTATAGGGGGTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGACAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	98.125	100	0.981
comE	Acinetobacter baylyi ADP1	41.279	100	0.444