Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | C6I29_RS13730 | Genome accession | NZ_CP027365 |
| Coordinates | 2924498..2925082 (-) | Length | 194 a.a. |
| NCBI ID | WP_005017910.1 | Uniprot ID | A0A062C4D5 |
| Organism | Acinetobacter radioresistens strain DSSKY-A-001 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2919498..2930082
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6I29_RS13710 | katE | 2919722..2921845 (+) | 2124 | WP_005024128.1 | catalase HPII | - |
| C6I29_RS13715 | - | 2922159..2922806 (+) | 648 | WP_005404646.1 | hypothetical protein | - |
| C6I29_RS13720 | - | 2923083..2923409 (+) | 327 | WP_005017916.1 | hypothetical protein | - |
| C6I29_RS13725 | - | 2923486..2924352 (+) | 867 | WP_034669792.1 | SDR family oxidoreductase | - |
| C6I29_RS13730 | ssb | 2924498..2925082 (-) | 585 | WP_005017910.1 | single-stranded DNA-binding protein | Machinery gene |
| C6I29_RS13735 | - | 2925134..2926498 (-) | 1365 | WP_005017908.1 | MFS transporter | - |
| C6I29_RS13745 | - | 2926647..2927729 (-) | 1083 | WP_034669790.1 | DUF475 domain-containing protein | - |
| C6I29_RS13750 | tenA | 2927970..2928644 (+) | 675 | WP_005017903.1 | thiaminase II | - |
Sequence
Protein
Download Length: 194 a.a. Molecular weight: 21073.77 Da Isoelectric Point: 6.4820
>NTDB_id=276626 C6I29_RS13730 WP_005017910.1 2924498..2925082(-) (ssb) [Acinetobacter radioresistens strain DSSKY-A-001]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKSTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDSGRQQGDQAGAGFGGDQGYGQPRFNNNQGSQGGYGNGNQQGSGFNNNSNQG
GGYGNNNPGGFAPKAPQSAPASQVPADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKSTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDSGRQQGDQAGAGFGGDQGYGQPRFNNNQGSQGGYGNGNQQGSGFNNNSNQG
GGYGNNNPGGFAPKAPQSAPASQVPADLDDDLPF
Nucleotide
Download Length: 585 bp
>NTDB_id=276626 C6I29_RS13730 WP_005017910.1 2924498..2925082(-) (ssb) [Acinetobacter radioresistens strain DSSKY-A-001]
ATGCGTGGTGTAAATAAGGTTATTTTAGTAGGGACTTTAGGGCGCGATCCAGAGACAAAAACTTTCCCAAATGGCGGCTC
TTTAACACAGTTTTCTATCGCAACGAGTGAATCGTGGACAGATAAAAGCACAGGTGAACGTAAAGAACAGACAGAATGGC
ACCGTATTGTGCTACACAACCGTCTAGGTGAAATTGCCCAGCAATATTTACGTAAAGGTTCAAAAGTTTATATTGAAGGT
TCATTGCGTACCCGTCAATGGACCGACCAGAACGGTCAGGAACGTTATACTACCGAGATTCGTGGTGAACAGATGCAGAT
GCTAGACTCAGGCCGACAGCAGGGCGATCAGGCAGGTGCAGGTTTTGGTGGTGATCAAGGCTATGGTCAACCACGTTTTA
ACAATAATCAGGGTAGCCAGGGCGGTTATGGTAACGGCAACCAGCAGGGTAGCGGTTTTAATAATAACAGCAACCAAGGT
GGCGGTTATGGCAATAATAACCCGGGCGGTTTCGCACCTAAAGCTCCTCAGTCAGCTCCAGCCTCTCAAGTTCCGGCTGA
CCTGGATGATGATCTGCCATTCTAA
ATGCGTGGTGTAAATAAGGTTATTTTAGTAGGGACTTTAGGGCGCGATCCAGAGACAAAAACTTTCCCAAATGGCGGCTC
TTTAACACAGTTTTCTATCGCAACGAGTGAATCGTGGACAGATAAAAGCACAGGTGAACGTAAAGAACAGACAGAATGGC
ACCGTATTGTGCTACACAACCGTCTAGGTGAAATTGCCCAGCAATATTTACGTAAAGGTTCAAAAGTTTATATTGAAGGT
TCATTGCGTACCCGTCAATGGACCGACCAGAACGGTCAGGAACGTTATACTACCGAGATTCGTGGTGAACAGATGCAGAT
GCTAGACTCAGGCCGACAGCAGGGCGATCAGGCAGGTGCAGGTTTTGGTGGTGATCAAGGCTATGGTCAACCACGTTTTA
ACAATAATCAGGGTAGCCAGGGCGGTTATGGTAACGGCAACCAGCAGGGTAGCGGTTTTAATAATAACAGCAACCAAGGT
GGCGGTTATGGCAATAATAACCCGGGCGGTTTCGCACCTAAAGCTCCTCAGTCAGCTCCAGCCTCTCAAGTTCCGGCTGA
CCTGGATGATGATCTGCCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
51.471 |
100 |
0.541 |
| ssb | Vibrio cholerae strain A1552 |
44.39 |
100 |
0.469 |
| ssb | Neisseria gonorrhoeae MS11 |
41 |
100 |
0.423 |
| ssb | Neisseria meningitidis MC58 |
40.5 |
100 |
0.418 |