Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | C6N17_RS02430 | Genome accession | NZ_CP027254 |
| Coordinates | 394205..394687 (+) | Length | 160 a.a. |
| NCBI ID | WP_002116770.1 | Uniprot ID | A0A009RUX0 |
| Organism | Acinetobacter pittii strain WCHAP100020 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 389205..399687
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N17_RS02420 (C6N17_02425) | pilX | 389519..390328 (+) | 810 | WP_002117088.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| C6N17_RS02425 (C6N17_02430) | pilY1 | 390340..394194 (+) | 3855 | WP_002116849.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| C6N17_RS02430 (C6N17_02435) | pilY2 | 394205..394687 (+) | 483 | WP_002116770.1 | type IV pilin protein | Machinery gene |
| C6N17_RS02435 (C6N17_02440) | pilE | 394684..395109 (+) | 426 | WP_002117055.1 | type IV pilin protein | Machinery gene |
| C6N17_RS02440 (C6N17_02445) | rpsP | 395257..395508 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| C6N17_RS02445 (C6N17_02450) | rimM | 395528..396076 (+) | 549 | WP_002116736.1 | ribosome maturation factor RimM | - |
| C6N17_RS02450 (C6N17_02455) | trmD | 396119..396874 (+) | 756 | WP_002116964.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| C6N17_RS02455 (C6N17_02460) | rplS | 397094..397462 (+) | 369 | WP_002116654.1 | 50S ribosomal protein L19 | - |
| C6N17_RS02460 (C6N17_02465) | lip | 397514..398455 (-) | 942 | WP_014207808.1 | lipase family alpha/beta hydrolase | - |
| C6N17_RS02465 (C6N17_02470) | - | 398571..399602 (-) | 1032 | WP_019767421.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17520.76 Da Isoelectric Point: 8.4721
>NTDB_id=276074 C6N17_RS02430 WP_002116770.1 394205..394687(+) (pilY2) [Acinetobacter pittii strain WCHAP100020]
MNKYYIQRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGAVTCNVCETNSENWQ
MNKYYIQRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGAVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=276074 C6N17_RS02430 WP_002116770.1 394205..394687(+) (pilY2) [Acinetobacter pittii strain WCHAP100020]
ATGAATAAATACTATATCCAACGGTTTAATCAGGGTGTTACCTTGATTGAGCTCATGGTTGTCATCGTGATTGTCGCTAT
TTTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGCAGAGCGACTGCCTCTGCTGCTAAAGGTGAAATTCTAA
AATTGGCAGAACAGTTGGAACGGCATAAATCCAAGAACTTTACCTATAGAGGATTTACTACGACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAGAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAATTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAGCAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAATACTATATCCAACGGTTTAATCAGGGTGTTACCTTGATTGAGCTCATGGTTGTCATCGTGATTGTCGCTAT
TTTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGCAGAGCGACTGCCTCTGCTGCTAAAGGTGAAATTCTAA
AATTGGCAGAACAGTTGGAACGGCATAAATCCAAGAACTTTACCTATAGAGGATTTACTACGACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAGAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAATTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAGCAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
93.75 |
100 |
0.938 |
| comE | Acinetobacter baylyi ADP1 |
40.678 |
100 |
0.45 |