Detailed information NTG0275999

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: C6N18_RS18280
• Genome accession: NZ_CP027246
• Coordinates: 3569965..3570447 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046489.1
• Uniprot ID: A0A0J0ZLV7
• Organism: Acinetobacter baumannii strain WCHAB005078
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3564965..3575447

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C6N18_RS18245 (C6N18_18265)	-	3565076..3566107 (+)	1032	WP_001189459.1	lipase secretion chaperone	-
C6N18_RS18250 (C6N18_18270)	-	3566222..3567163 (+)	942	WP_085916958.1	lipase family alpha/beta hydrolase	-
C6N18_RS18255 (C6N18_18275)	rplS	3567215..3567583 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
C6N18_RS18260 (C6N18_18280)	trmD	3567791..3568531 (-)	741	WP_000464595.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
C6N18_RS18265 (C6N18_18285)	rimM	3568577..3569125 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
C6N18_RS18270 (C6N18_18290)	rpsP	3569145..3569396 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
C6N18_RS18275 (C6N18_18295)	pilE	3569543..3569968 (-)	426	WP_000788336.1	type IV pilin protein	Machinery gene
C6N18_RS18280 (C6N18_18300)	pilY2	3569965..3570447 (-)	483	WP_001046489.1	type IV pilin protein	Machinery gene
C6N18_RS18285 (C6N18_18305)	pilY1	3570458..3574312 (-)	3855	WP_059264959.1	vWA domain-containing protein	Machinery gene
C6N18_RS18290 (C6N18_18310)	pilX	3574324..3575142 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17657.94 Da
• Isoelectric Point: 8.4737

>NTDB_id=275999 C6N18_RS18280 WP_001046489.1 3569965..3570447(-) (pilY2) [Acinetobacter baumannii strain WCHAB005078]
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ

Nucleotide

• Length: 483 bp

>NTDB_id=275999 C6N18_RS18280 WP_001046489.1 3569965..3570447(-) (pilY2) [Acinetobacter baumannii strain WCHAB005078]
ATGAATAAGTACTACATTTTACGGTTCAATCAGGGTTTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

3D structure

• AlphaFold DB: A0A0J0ZLV7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	96.25	100	0.963
comE	Acinetobacter baylyi ADP1	41.86	100	0.45