Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | C6N18_RS18275 | Genome accession | NZ_CP027246 |
| Coordinates | 3569543..3569968 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788336.1 | Uniprot ID | A0A0J0ZME6 |
| Organism | Acinetobacter baumannii strain WCHAB005078 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3564543..3574968
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N18_RS18245 (C6N18_18265) | - | 3565076..3566107 (+) | 1032 | WP_001189459.1 | lipase secretion chaperone | - |
| C6N18_RS18250 (C6N18_18270) | - | 3566222..3567163 (+) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| C6N18_RS18255 (C6N18_18275) | rplS | 3567215..3567583 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| C6N18_RS18260 (C6N18_18280) | trmD | 3567791..3568531 (-) | 741 | WP_000464595.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| C6N18_RS18265 (C6N18_18285) | rimM | 3568577..3569125 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| C6N18_RS18270 (C6N18_18290) | rpsP | 3569145..3569396 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| C6N18_RS18275 (C6N18_18295) | pilE | 3569543..3569968 (-) | 426 | WP_000788336.1 | type IV pilin protein | Machinery gene |
| C6N18_RS18280 (C6N18_18300) | pilY2 | 3569965..3570447 (-) | 483 | WP_001046489.1 | type IV pilin protein | Machinery gene |
| C6N18_RS18285 (C6N18_18305) | pilY1 | 3570458..3574312 (-) | 3855 | WP_059264959.1 | vWA domain-containing protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15175.41 Da Isoelectric Point: 7.8144
>NTDB_id=275998 C6N18_RS18275 WP_000788336.1 3569543..3569968(-) (pilE) [Acinetobacter baumannii strain WCHAB005078]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=275998 C6N18_RS18275 WP_000788336.1 3569543..3569968(-) (pilE) [Acinetobacter baumannii strain WCHAB005078]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCAACTATACAATCAATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAATACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAGGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCAACTATACAATCAATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAATACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAGGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.071 |
100 |
0.901 |
| comF | Acinetobacter baylyi ADP1 |
49.286 |
99.291 |
0.489 |