Detailed information NTG0027541

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: SSA_RS09525
• Genome accession: NC_009009
• Coordinates: 1937788..1938714 (-)
• Length: 308 a.a.
• NCBI ID: WP_002893621.1
• Uniprot ID: A3CQ66
• Organism: Streptococcus sanguinis SK36
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1932788..1943714

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSA_RS09515 (SSA_1944)	amiF	1935775..1936701 (-)	927	WP_002893618.1	ATP-binding cassette domain-containing protein	Regulator
SSA_RS09520 (SSA_1945)	amiE	1936712..1937779 (-)	1068	WP_002902455.1	ABC transporter ATP-binding protein	Regulator
SSA_RS09525 (SSA_1946)	amiD	1937788..1938714 (-)	927	WP_002893621.1	oligopeptide ABC transporter permease OppC	Regulator
SSA_RS09530 (SSA_1947)	amiC	1938714..1940210 (-)	1497	WP_002902452.1	ABC transporter permease	Regulator
SSA_RS09535 (SSA_1948)	amiA	1940275..1942260 (-)	1986	WP_011837459.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34640.69 Da
• Isoelectric Point: 9.8486

>NTDB_id=27541 SSA_RS09525 WP_002893621.1 1937788..1938714(-) (amiD) [Streptococcus sanguinis SK36]
MATIDKSKFQFVKRDDFASETIDAPAYSYWKSVMRQFLKKKSTITMLGILIAIILMSFIYPMFSNFDFNDVSKVNDFSMR
YIKPSSQYWFGTDSNGKSLFDGVWFGARNSILISIIATVINLAIGVIIGGIWGISKTVDRVMMEIYNIISNIPALLIVIV
LTYSIGAGFWNLIFAMTITGWVGIAYTIRVQIMRYRDLEYNLASRTLGTPTLKIVTKNIMPQLVSVIVTTTSQMLPSFIS
YEAFLSFFGLGLPVTVPSLGRLISDYSQNVTTNAYLFWIPLTTLILVSLTFFVVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=27541 SSA_RS09525 WP_002893621.1 1937788..1938714(-) (amiD) [Streptococcus sanguinis SK36]
ATGGCTACAATTGATAAAAGCAAATTCCAATTTGTCAAACGTGACGATTTTGCCTCTGAAACGATTGATGCTCCAGCCTA
TTCTTACTGGAAATCAGTCATGCGTCAATTTCTGAAAAAGAAATCAACCATTACCATGCTGGGGATTCTGATTGCCATTA
TTCTCATGAGCTTCATTTATCCTATGTTTTCAAACTTCGACTTTAATGACGTGAGCAAGGTAAACGACTTTAGCATGCGT
TACATCAAACCAAGTTCTCAATACTGGTTTGGAACGGATAGTAATGGTAAGTCTCTCTTTGATGGTGTTTGGTTTGGTGC
TCGTAACTCTATTCTTATTTCGATTATTGCGACGGTTATTAATCTGGCTATCGGAGTTATCATTGGCGGTATCTGGGGAA
TTTCCAAAACAGTTGACCGTGTCATGATGGAAATCTACAATATCATTTCAAATATCCCAGCCCTCTTGATTGTCATTGTC
TTGACCTACTCTATCGGTGCTGGTTTCTGGAATCTTATTTTTGCCATGACGATTACTGGTTGGGTCGGTATTGCCTACAC
TATCCGTGTGCAGATTATGCGCTATCGGGATTTGGAATACAACCTTGCCTCTCGTACTCTTGGTACACCGACTCTAAAGA
TTGTTACGAAGAATATTATGCCGCAGTTGGTATCTGTTATCGTGACTACCACTTCACAGATGTTGCCAAGCTTTATCTCT
TACGAAGCCTTTCTGTCCTTCTTTGGATTAGGTCTTCCTGTAACAGTGCCAAGTTTGGGACGCCTGATTTCAGATTATTC
TCAAAATGTGACGACGAATGCCTACCTCTTTTGGATTCCACTCACAACTCTGATTTTGGTATCTCTTACCTTCTTCGTAG
TTGGTCAAAACTTAGCTGACGCCAGCGATCCACGTACACATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-72)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

3D structure

• AlphaFold DB: A3CQ66

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	86.039	100	0.86
amiD	Streptococcus thermophilus LMG 18311	84.091	100	0.841
amiD	Streptococcus thermophilus LMD-9	84.091	100	0.841