Detailed information NTG0027539

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: SSA_RS09515
• Genome accession: NC_009009
• Coordinates: 1935775..1936701 (-)
• Length: 308 a.a.
• NCBI ID: WP_002893618.1
• Uniprot ID: A0A427ZQ80
• Organism: Streptococcus sanguinis SK36
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1930775..1941701

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSA_RS09515 (SSA_1944)	amiF	1935775..1936701 (-)	927	WP_002893618.1	ATP-binding cassette domain-containing protein	Regulator
SSA_RS09520 (SSA_1945)	amiE	1936712..1937779 (-)	1068	WP_002902455.1	ABC transporter ATP-binding protein	Regulator
SSA_RS09525 (SSA_1946)	amiD	1937788..1938714 (-)	927	WP_002893621.1	oligopeptide ABC transporter permease OppC	Regulator
SSA_RS09530 (SSA_1947)	amiC	1938714..1940210 (-)	1497	WP_002902452.1	ABC transporter permease	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34855.82 Da
• Isoelectric Point: 5.6787

>NTDB_id=27539 SSA_RS09515 WP_002893618.1 1935775..1936701(-) (amiF) [Streptococcus sanguinis SK36]
MTEKLVEIKDLEISFGEGSKKFVAVKNANFFINKGETFSLVGESGSGKTTIGRAIIGLNDTSAGDIFYEGKKINGKKSKA
EEADLIRKIQMIFQDPAASLNERATVDYIISEGLYNYHLFDSEEDRQRKVKDIINEVGLLAEHLTRYPHEFSGGQRQRIG
IARALVMQPDFVIADEPISALDVSVRAQVLNLLKKFQKELGLTYLFIAHDLSVVRFISDRIAVIYKGVIVEVAETEELFN
HPVHPYTQSLLSAVPIPDPILERKKVLKVYDPDQHDYSVDKPEMAEIRPGHYVWANKAELEKYKQEQE

Nucleotide

• Length: 927 bp

>NTDB_id=27539 SSA_RS09515 WP_002893618.1 1935775..1936701(-) (amiF) [Streptococcus sanguinis SK36]
ATGACTGAAAAATTAGTTGAAATTAAAGATTTAGAAATTTCCTTCGGTGAAGGAAGTAAGAAATTTGTAGCAGTTAAAAA
TGCAAATTTCTTCATCAACAAGGGAGAAACTTTCTCTCTTGTAGGAGAATCAGGCTCTGGTAAGACTACTATTGGTCGAG
CTATTATCGGTCTTAATGATACCAGTGCAGGAGATATCTTCTATGAAGGCAAAAAGATTAATGGTAAAAAGTCAAAAGCA
GAAGAAGCGGACTTGATTCGCAAGATTCAGATGATTTTCCAAGACCCGGCTGCCAGTCTGAATGAACGTGCAACGGTTGA
CTATATCATATCTGAGGGTCTCTATAATTACCATTTGTTTGATAGCGAAGAAGATCGTCAAAGAAAAGTCAAAGATATCA
TCAATGAAGTTGGCTTGTTAGCTGAGCATTTAACTCGCTATCCTCACGAATTCTCTGGTGGACAGCGTCAGCGGATTGGG
ATTGCTCGTGCTCTGGTCATGCAACCAGACTTCGTAATTGCAGATGAGCCGATTTCTGCCTTGGACGTATCTGTTCGGGC
TCAGGTTTTGAATCTTTTGAAAAAATTTCAAAAAGAGCTTGGCTTGACCTACCTGTTTATTGCCCATGACCTTTCGGTAG
TTCGTTTTATTTCTGATCGTATCGCCGTGATTTACAAAGGTGTCATTGTAGAAGTGGCAGAGACAGAGGAGCTGTTCAAC
CATCCTGTCCATCCTTACACACAATCCTTACTCTCAGCTGTACCAATTCCTGACCCAATCTTGGAGCGTAAAAAAGTGTT
GAAGGTCTATGATCCTGACCAGCACGATTATTCAGTTGATAAACCAGAAATGGCAGAGATTCGTCCGGGACACTACGTCT
GGGCTAATAAAGCTGAACTCGAAAAGTATAAACAAGAACAAGAATAG

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

• ABC transporter (ABC_tran) (25-178)

3D structure

• AlphaFold DB: A0A427ZQ80

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus salivarius strain HSISS4	85.668	99.675	0.854
amiF	Streptococcus thermophilus LMG 18311	85.016	99.675	0.847
amiF	Streptococcus thermophilus LMD-9	84.691	99.675	0.844