Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SSA_RS07630 Genome accession   NC_009009
Coordinates   1566546..1567346 (-) Length   266 a.a.
NCBI ID   WP_011837210.1    Uniprot ID   -
Organism   Streptococcus sanguinis SK36     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1561546..1572346
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSA_RS07615 (SSA_1560) smc 1561748..1565284 (-) 3537 WP_011837209.1 chromosome segregation protein SMC -
  SSA_RS07620 (SSA_1561) rnc 1565275..1565973 (-) 699 WP_002903151.1 ribonuclease III -
  SSA_RS07625 (SSA_1562) - 1566095..1566454 (-) 360 WP_004192874.1 DUF454 family protein -
  SSA_RS07630 (SSA_1563) vicX 1566546..1567346 (-) 801 WP_011837210.1 MBL fold metallo-hydrolase Regulator
  SSA_RS07635 (SSA_1564) micB 1567356..1568705 (-) 1350 WP_002899938.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SSA_RS07640 (SSA_1565) micA 1568698..1569399 (-) 702 WP_002894937.1 response regulator YycF Regulator
  SSA_RS07645 (SSA_1566) - 1569739..1570500 (+) 762 WP_011837211.1 amino acid ABC transporter ATP-binding protein -
  SSA_RS07650 (SSA_1567) - 1570515..1571327 (+) 813 WP_011837212.1 transporter substrate-binding domain-containing protein -
  SSA_RS07655 (SSA_1568) - 1571340..1572020 (+) 681 WP_002906090.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29748.62 Da        Isoelectric Point: 5.9065

>NTDB_id=27527 SSA_RS07630 WP_011837210.1 1566546..1567346(-) (vicX) [Streptococcus sanguinis SK36]
MTKGFQYSILASGSSGNCFYLETDQKRILVDAGLSGKKITSLLGEIDRKPEDLDAILVTHEHKDHIHGVGVLARKYHLDI
YANEATWKAMEKDLGKLDASQKHVFELGKTKTFGDLDVESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMAGIIE
NADGYLIESNHDIEILRSGAYPWSLKQRILSDMGHLSNEDGAETMIRTLGNRTKRIYLGHLSKENNIKELAHMTMVNQLA
QADMAVGHDFQVYDTSPDTATPLTNI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=27527 SSA_RS07630 WP_011837210.1 1566546..1567346(-) (vicX) [Streptococcus sanguinis SK36]
ATGACTAAAGGATTTCAATATAGTATTCTGGCGTCAGGATCAAGCGGTAACTGTTTCTATCTGGAAACAGATCAAAAGCG
GATTCTGGTTGACGCTGGCTTATCAGGCAAGAAAATCACTAGCTTGCTGGGCGAAATTGACCGCAAGCCTGAGGATTTGG
ATGCTATTTTAGTGACTCATGAGCACAAGGATCACATTCATGGTGTTGGTGTATTGGCTCGCAAGTATCATCTGGATATT
TATGCTAATGAGGCCACTTGGAAGGCTATGGAAAAGGACTTAGGCAAGCTGGATGCTAGTCAAAAGCATGTCTTTGAACT
GGGCAAGACCAAGACCTTTGGAGACTTGGATGTGGAGAGCTTTGGTGTCAGTCATGACGCAGCCTGTCCGCAGTTTTACC
GCTTCATGAAGGATGACAAGAGTTTTGTCATGCTGACGGATACGGGCTATGTCAGTGATCGGATGGCTGGGATTATCGAA
AATGCCGACGGGTACCTGATTGAGAGCAACCATGATATTGAAATTCTTCGCAGTGGTGCCTATCCTTGGAGTCTCAAGCA
GCGGATTCTGTCGGATATGGGCCACTTGTCCAATGAAGATGGAGCAGAGACCATGATTCGGACTCTGGGCAATCGCACCA
AGCGAATCTATCTGGGACATCTCAGTAAGGAAAATAATATCAAGGAATTGGCTCACATGACCATGGTCAATCAACTGGCT
CAAGCCGATATGGCGGTCGGTCATGACTTTCAGGTCTATGATACCTCGCCTGATACCGCGACACCTTTGACGAATATTTA
A

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

81.369

98.872

0.805

Multiple sequence alignment