Detailed information NTG0027522

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: APJL_RS05735
• Genome accession: NC_010278
• Coordinates: 1283979..1285109 (-)
• Length: 376 a.a.
• NCBI ID: WP_005598042.1
• Uniprot ID: A0ABM6X324
• Organism: Actinobacillus pleuropneumoniae serovar 3 str. JL03
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1278979..1290109

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
APJL_RS05685 (APJL_1157)	ubiK	1280310..1280561 (-)	252	WP_005598032.1	ubiquinone biosynthesis accessory factor UbiK	-
APJL_RS05710 (APJL_1158)	aroE	1281245..1282069 (-)	825	WP_005601621.1	shikimate dehydrogenase	-
APJL_RS05715 (APJL_1159)	-	1282076..1282630 (-)	555	WP_005601623.1	Sua5/YciO/YrdC/YwlC family protein	-
APJL_RS05720 (APJL_1160)	-	1282623..1283156 (-)	534	WP_012263112.1	type I DNA topoisomerase	-
APJL_RS05725 (APJL_1161)	yqfB	1283153..1283461 (-)	309	WP_005608348.1	N(4)-acetylcytidine aminohydrolase	-
APJL_RS05730 (APJL_1162)	recX	1283454..1283910 (-)	457	Protein_1117	recombination regulator RecX	-
APJL_RS05735 (APJL_1163)	recA	1283979..1285109 (-)	1131	WP_005598042.1	recombinase RecA	Machinery gene
APJL_RS05740 (APJL_1164)	-	1285223..1285828 (-)	606	WP_012263114.1	aminotransferase class IV family protein	-
APJL_RS05745 (APJL_1165)	-	1285806..1286774 (-)	969	WP_012263115.1	aminodeoxychorismate synthase component I	-
APJL_RS05750 (APJL_1166)	rmuC	1286909..1288543 (+)	1635	WP_012263116.1	DNA recombination protein RmuC	-
APJL_RS05755 (APJL_1167)	-	1288515..1289126 (+)	612	WP_043947954.1	anthranilate synthase component II	-
APJL_RS05760 (APJL_1168)	-	1289198..1289647 (+)	450	WP_005619439.1	DUF302 domain-containing protein	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 40544.17 Da
• Isoelectric Point: 4.5846

>NTDB_id=27522 APJL_RS05735 WP_005598042.1 1283979..1285109(-) (recA) [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
MAADNKKAQKNTVTKQIDPEQKEKALAAALAQIEKQFGKGSIMRLGDTQALDIEAVSTGSIGLDAALGIGGLPMGRIVEI
YGPESSGKTTLTLSVIAQAQKSGKTCAFIDAEHALDPVYARKLGVDTDALLISQPDNGEQALEICDALVRSGAVDVIIVD
SVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKATNCLVVFINQIRMKIGVMFGNPETTTGGNALKFYASVRLD
IRRSGVVKDGDEVVGSETKVKIVKNKVAPPFREVQFDIMYGEGISRMNELLILAEANGFIQKAGAWFSYEGTKIGQGKNN
AIKWLKENPEIAEKIEQDIREQLISTPEKTSAGEQNVLDADDVNDFEDEAFNEEEL

Nucleotide

• Length: 1131 bp

>NTDB_id=27522 APJL_RS05735 WP_005598042.1 1283979..1285109(-) (recA) [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
ATGGCAGCGGATAACAAAAAAGCGCAAAAGAACACAGTAACAAAACAAATCGATCCGGAACAAAAAGAAAAAGCATTAGC
TGCTGCTCTTGCCCAAATTGAAAAACAATTTGGTAAAGGTTCTATTATGCGCTTAGGCGACACGCAAGCGCTTGATATTG
AAGCGGTTTCAACCGGTTCAATCGGTTTAGACGCCGCATTAGGTATCGGTGGCTTACCGATGGGACGTATCGTTGAGATC
TATGGGCCGGAATCTTCAGGTAAAACGACGCTGACTTTATCGGTCATTGCGCAAGCACAAAAATCAGGTAAAACTTGTGC
GTTTATTGATGCGGAACACGCGCTTGATCCGGTTTATGCACGTAAATTAGGCGTGGATACCGATGCATTGTTAATTTCAC
AACCGGATAACGGTGAACAAGCGCTCGAGATTTGTGATGCGTTGGTTCGTTCCGGTGCGGTTGATGTAATTATTGTGGAC
TCGGTAGCCGCATTAACGCCGAAAGCGGAAATTGAAGGCGATATGGGCGATTCTCATATGGGCTTACAAGCACGTTTAAT
GTCACAAGCGTTACGTAAATTAACGGCAAACATTAAGGCGACTAACTGCTTAGTGGTGTTTATCAACCAAATTCGTATGA
AGATCGGTGTGATGTTCGGTAACCCTGAAACAACAACCGGCGGTAACGCACTTAAATTCTACGCTTCGGTTCGTTTAGAT
ATTCGTCGTTCAGGTGTAGTAAAAGACGGAGATGAAGTGGTCGGTAGCGAAACGAAAGTGAAAATTGTGAAAAATAAAGT
TGCGCCGCCGTTCCGTGAAGTTCAATTCGACATTATGTATGGTGAAGGTATTTCACGTATGAATGAACTATTAATTCTTG
CCGAAGCAAACGGTTTTATCCAAAAAGCGGGTGCATGGTTCTCATACGAAGGTACGAAAATCGGTCAAGGTAAAAATAAT
GCAATTAAATGGTTAAAAGAAAATCCGGAGATTGCAGAGAAAATTGAACAAGATATTCGTGAGCAACTTATTTCAACACC
GGAAAAAACATCGGCAGGTGAACAAAATGTGCTAGATGCCGATGATGTGAATGACTTTGAAGACGAAGCGTTTAACGAAG
AAGAACTATAA

Domains

Predicted by InterProScan.

• recA bacterial DNA recombination protein (RecA_N) (24-285)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Glaesserella parasuis strain SC1401	83.777	100	0.838
recA	Pseudomonas stutzeri DSM 10701	72.093	91.489	0.66
recA	Acinetobacter nosocomialis M2	75.535	86.968	0.657
recA	Vibrio cholerae strain A1552	71.512	91.489	0.654
recA	Vibrio cholerae O1 biovar El Tor strain E7946	71.512	91.489	0.654
recA	Acinetobacter baumannii D1279779	75.229	86.968	0.654
recA	Acinetobacter baylyi ADP1	72.836	89.096	0.649
recA	Neisseria gonorrhoeae MS11	71.429	85.638	0.612
recA	Neisseria gonorrhoeae strain FA1090	71.429	85.638	0.612
recA	Ralstonia pseudosolanacearum GMI1000	71.429	83.777	0.598
recA	Streptococcus mutans UA159	57.254	100	0.588
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	65.455	87.766	0.574
recA	Streptococcus mitis SK321	58.583	97.606	0.572
recA	Streptococcus mitis NCTC 12261	58.583	97.606	0.572
recA	Streptococcus pneumoniae R6	59.167	95.745	0.566
recA	Streptococcus pneumoniae D39	59.167	95.745	0.566
recA	Streptococcus pneumoniae R36A	59.167	95.745	0.566
recA	Streptococcus pneumoniae Rx1	59.167	95.745	0.566
recA	Streptococcus pneumoniae TIGR4	59.167	95.745	0.566
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	63.692	86.436	0.551
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	61.677	88.83	0.548
recA	Streptococcus thermophilus LMD-9	59.884	91.489	0.548
recA	Streptococcus thermophilus LMG 18311	59.884	91.489	0.548
recA	Bacillus subtilis subsp. subtilis str. 168	63.551	85.372	0.543
recA	Streptococcus pyogenes NZ131	59.412	90.426	0.537
recA	Helicobacter pylori strain NCTC11637	61.212	87.766	0.537
recA	Helicobacter pylori 26695	60.909	87.766	0.535
recA	Staphylococcus aureus strain ATCC 12600	62.112	85.638	0.532
recA	Lactococcus lactis subsp. cremoris KW2	57.018	90.957	0.519
recA	Latilactobacillus sakei subsp. sakei 23K	57.944	85.372	0.495