Detailed information NTG0275078

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: C5695_RS17785
• Genome accession: NZ_CP027116
• Coordinates: 3416707..3417882 (-)
• Length: 391 a.a.
• NCBI ID: WP_117732086.1
• Uniprot ID: A0AAD0MPJ6
• Organism: Bacillus pumilus strain 145
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3411707..3422882

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C5695_RS17755 (C5695_17820)	-	3411891..3412310 (-)	420	WP_117732078.1	TIGR03826 family flagellar region protein	-
C5695_RS20705 (C5695_17825)	comFC	3412367..3412948 (-)	582	WP_336470382.1	ComF family protein	Machinery gene
C5695_RS17765 (C5695_17830)	-	3413050..3413343 (-)	294	WP_117732082.1	late competence development ComFB family protein	-
C5695_RS17770 (C5695_17835)	comFA	3413393..3414772 (-)	1380	WP_272866845.1	DEAD/DEAH box helicase	Machinery gene
C5695_RS17775 (C5695_17840)	-	3414893..3415735 (-)	843	WP_117732084.1	DegV family protein	-
C5695_RS17780 (C5695_17845)	degU	3415953..3416642 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
C5695_RS17785 (C5695_17850)	degS	3416707..3417882 (-)	1176	WP_117732086.1	sensor histidine kinase	Regulator
C5695_RS17790 (C5695_17855)	-	3418104..3418772 (+)	669	WP_117732088.1	YigZ family protein	-
C5695_RS17795 (C5695_17860)	-	3418757..3419857 (+)	1101	WP_117732090.1	LCP family protein	-
C5695_RS17800 (C5695_17865)	-	3419894..3420961 (-)	1068	WP_117732092.1	MraY family glycosyltransferase	-
C5695_RS17805 (C5695_17870)	-	3421096..3422292 (-)	1197	WP_233230878.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45550.32 Da
• Isoelectric Point: 6.1329

>NTDB_id=275078 C5695_RS17785 WP_117732086.1 3416707..3417882(-) (degS) [Bacillus pumilus strain 145]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKIKFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=275078 C5695_RS17785 WP_117732086.1 3416707..3417882(-) (degS) [Bacillus pumilus strain 145]
ATGACAACACCAAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGGATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTGAAGCAAATCAAGCAGCAAG
TAAACGAAGTGATTGATTTTGGGGATAAACTAGAAGTCCATACGAGACATGCTAGAAATCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTTAGCGAAGAAGAAATACGAGAGGCCTACGAAAAAGCACATAATCTGCAAGTAGAACTCACCATGAT
CCAGCAGCGCGAAAAGCAGCTAAGAGAAAGAAGAGACGATCTGGAAAGACGATTATTAAGCCTGCAAGACGTCATTGAAC
GCTCTGAAACGCTTGTGAGTCAAATCACAGTTGTTCTCAACTATCTCAATCAGGACTTACGCCAAGTCGGCGTTTTACTT
GAAGATGCTCAAGCAAAGCAAGATTTTGGGCTTAGAATTATTGAAGCCCAGGAAGAGGAGCGCAAAAGGGTGTCCCGGGA
AATTCATGACGGTCCGGCTCAAATGCTGGCAAACGTGATGATGCGCTCAGAGTTAATTGAACGGATTTTCAGAGACCGAG
GTACCGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCTCTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACGCTAAGAAAATATTTAAACACAATCGAAGAATA
TGATGGGAAAACCAAGATTAAGTTCCAATGCCTAGGGGATACAGAAAGCGAAAGAATTGCTTCACAATTTGAAGTAGCAC
TATTTAGACTAGCCCAAGAAGCAGTCACAAATTCACTAAAGCATTCTGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTG
ACGAAAGACTTTGTCACGTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACGATAGACTCTAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841