Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | LLMG_RS12430 | Genome accession | NC_009004 |
| Coordinates | 2431325..2431825 (-) | Length | 166 a.a. |
| NCBI ID | WP_011677241.1 | Uniprot ID | A0A0M2ZSZ2 |
| Organism | Lactococcus cremoris subsp. cremoris MG1363 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2426325..2436825
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LLMG_RS12405 (llmg_2469) | gnd | 2427450..2428355 (-) | 906 | WP_011836101.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| LLMG_RS12410 (llmg_2470) | - | 2428725..2429573 (+) | 849 | WP_011836102.1 | MurR/RpiR family transcriptional regulator | - |
| LLMG_RS12415 (llmg_2471) | - | 2429612..2429920 (+) | 309 | WP_011836103.1 | DUF960 domain-containing protein | - |
| LLMG_RS12420 (llmg_2472) | - | 2429992..2430777 (-) | 786 | WP_011836104.1 | metallophosphoesterase | - |
| LLMG_RS12425 (llmg_2473) | rpsR | 2430908..2431153 (-) | 246 | WP_003131952.1 | 30S ribosomal protein S18 | - |
| LLMG_RS12430 (llmg_2474) | ssb | 2431325..2431825 (-) | 501 | WP_011677241.1 | single-stranded DNA-binding protein | Machinery gene |
| LLMG_RS12435 (llmg_2475) | rpsF | 2431855..2432148 (-) | 294 | WP_011677242.1 | 30S ribosomal protein S6 | - |
| LLMG_RS12440 (llmg_2476) | - | 2432342..2433196 (-) | 855 | WP_011836105.1 | undecaprenyl-diphosphate phosphatase | - |
| LLMG_RS12445 (llmg_2477) | - | 2433718..2435184 (+) | 1467 | WP_014735185.1 | amino acid permease | - |
Sequence
Protein
Download Length: 166 a.a. Molecular weight: 18233.05 Da Isoelectric Point: 5.2166
>NTDB_id=27491 LLMG_RS12430 WP_011677241.1 2431325..2431825(-) (ssb) [Lactococcus cremoris subsp. cremoris MG1363]
MINNVVLVGRITRDPELRYTPQNQAVATFSLAVNRQFKNANGEREADFINCVIWRQQAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADSFQMLESRSARDGMGGGASAGSYSAPSQSTNNTPRPQTNNNSATPNFGRDADPFGSSPMEIS
DDDLPF
MINNVVLVGRITRDPELRYTPQNQAVATFSLAVNRQFKNANGEREADFINCVIWRQQAENLANWAKKGALIGVTGRIQTR
NYENQQGQRVYVTEVVADSFQMLESRSARDGMGGGASAGSYSAPSQSTNNTPRPQTNNNSATPNFGRDADPFGSSPMEIS
DDDLPF
Nucleotide
Download Length: 501 bp
>NTDB_id=27491 LLMG_RS12430 WP_011677241.1 2431325..2431825(-) (ssb) [Lactococcus cremoris subsp. cremoris MG1363]
ATGATTAACAATGTTGTATTAGTGGGACGCATTACTCGCGATCCTGAACTTCGTTACACCCCTCAAAATCAAGCTGTTGC
AACTTTTTCATTGGCTGTAAATCGTCAATTTAAAAATGCTAACGGTGAACGTGAGGCTGATTTCATTAACTGCGTTATTT
GGCGCCAACAAGCTGAAAATTTGGCAAATTGGGCTAAAAAAGGAGCTTTGATCGGTGTAACTGGTCGAATTCAAACACGT
AATTATGAAAATCAACAAGGTCAACGCGTTTATGTGACTGAGGTTGTGGCTGATAGTTTCCAAATGTTGGAAAGTAGATC
TGCTCGCGATGGTATGGGAGGCGGAGCTTCTGCCGGTTCATATTCTGCACCAAGCCAATCTACAAATAATACTCCACGTC
CACAAACGAATAATAATAGTGCAACACCGAATTTCGGTCGTGATGCTGACCCATTTGGTAGCTCACCTATGGAAATCTCG
GATGATGATCTTCCATTCTAA
ATGATTAACAATGTTGTATTAGTGGGACGCATTACTCGCGATCCTGAACTTCGTTACACCCCTCAAAATCAAGCTGTTGC
AACTTTTTCATTGGCTGTAAATCGTCAATTTAAAAATGCTAACGGTGAACGTGAGGCTGATTTCATTAACTGCGTTATTT
GGCGCCAACAAGCTGAAAATTTGGCAAATTGGGCTAAAAAAGGAGCTTTGATCGGTGTAACTGGTCGAATTCAAACACGT
AATTATGAAAATCAACAAGGTCAACGCGTTTATGTGACTGAGGTTGTGGCTGATAGTTTCCAAATGTTGGAAAGTAGATC
TGCTCGCGATGGTATGGGAGGCGGAGCTTCTGCCGGTTCATATTCTGCACCAAGCCAATCTACAAATAATACTCCACGTC
CACAAACGAATAATAATAGTGCAACACCGAATTTCGGTCGTGATGCTGACCCATTTGGTAGCTCACCTATGGAAATCTCG
GATGATGATCTTCCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.884 |
100 |
0.62 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
56.395 |
100 |
0.584 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.855 |
0.373 |
| ssb | Glaesserella parasuis strain SC1401 |
33.898 |
100 |
0.361 |