Detailed information NTG0274589

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: FORC77_RS02915
• Genome accession: NZ_CP027030
• Coordinates: 590931..591800 (-)
• Length: 289 a.a.
• NCBI ID: WP_131069647.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain FORC_077
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 585931..596800

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FORC77_RS02880 (FORC77_0511)	rpsP	587074..587322 (+)	249	WP_011079541.1	30S ribosomal protein S16	-
FORC77_RS02885 (FORC77_0512)	rimM	587338..587886 (+)	549	WP_011079542.1	ribosome maturation factor RimM	-
FORC77_RS02890 (FORC77_0513)	trmD	587914..588663 (+)	750	WP_011079543.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
FORC77_RS02895 (FORC77_0514)	rplS	588705..589058 (+)	354	WP_011079544.1	50S ribosomal protein L19	-
FORC77_RS02900 (FORC77_0515)	yacG	589291..589485 (-)	195	WP_026060801.1	DNA gyrase inhibitor YacG	-
FORC77_RS02905 (FORC77_0516)	zapD	589548..590288 (-)	741	WP_011079546.1	cell division protein ZapD	-
FORC77_RS02910 (FORC77_0517)	coaE	590321..590929 (-)	609	WP_039554617.1	dephospho-CoA kinase	-
FORC77_RS02915 (FORC77_0518)	pilD	590931..591800 (-)	870	WP_131069647.1	A24 family peptidase	Machinery gene
FORC77_RS02920 (FORC77_0519)	pilC	591894..593120 (-)	1227	WP_011079549.1	type II secretion system F family protein	Machinery gene
FORC77_RS02925 (FORC77_0520)	pilB	593168..594856 (-)	1689	WP_080538712.1	type IV-A pilus assembly ATPase PilB	Machinery gene
FORC77_RS02930 (FORC77_0521)	pilA	594861..595286 (-)	426	WP_072608924.1	pilin	Machinery gene
FORC77_RS02935 (FORC77_0522)	nadC	595509..596396 (-)	888	WP_072608923.1	carboxylating nicotinate-nucleotide diphosphorylase	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 32290.42 Da
• Isoelectric Point: 7.5685

>NTDB_id=274589 FORC77_RS02915 WP_131069647.1 590931..591800(-) (pilD) [Vibrio vulnificus strain FORC_077]
MDALQYYPWLYIGLASLFGLLVGSFLNVVIYRLPKIMELEWRQECAESFPEYKISPPTKTLTLSTPRSSCPSCHTPIRVR
DNIPVFSWLALRGKCHHCQTKISARYPFVEALSAFLCGLVTWKFGYAPITVALIGFTLVLIAATFIDLDTMLLPDQLTLP
LTWAGIALALLEISPVSLQDSVIGTMAGYLCLWSVYHLFRLLTGKEGMGYGDFKLLAALGAWLGWQYLPMIILLSSVVGL
IFGLIQLRLQKQGIEMAFPFGPYLAIAGWVALMWGDSLMSWYLNYLIGA

Nucleotide

• Length: 870 bp

>NTDB_id=274589 FORC77_RS02915 WP_131069647.1 590931..591800(-) (pilD) [Vibrio vulnificus strain FORC_077]
ATGGACGCGTTACAATACTACCCTTGGCTTTATATTGGTTTAGCTTCCCTGTTTGGCTTACTGGTAGGCAGCTTTCTTAA
CGTCGTCATCTACCGCCTACCAAAAATAATGGAACTGGAGTGGCGCCAAGAGTGTGCAGAGTCCTTTCCTGAATACAAAA
TATCACCGCCGACAAAAACCCTAACATTAAGCACGCCGCGTTCAAGTTGCCCTTCGTGCCATACCCCAATACGAGTTCGA
GATAATATTCCTGTCTTTAGTTGGCTAGCTCTAAGAGGAAAATGTCACCATTGCCAGACGAAAATCAGTGCTCGCTATCC
TTTTGTTGAAGCACTGAGCGCCTTTTTGTGCGGCCTAGTCACTTGGAAGTTCGGTTATGCACCGATTACCGTAGCACTGA
TTGGTTTTACTTTGGTGTTGATCGCCGCTACCTTCATCGACTTAGATACCATGCTACTGCCTGATCAGCTGACACTGCCG
CTGACGTGGGCAGGCATCGCGCTAGCGTTACTAGAGATAAGCCCAGTATCTCTGCAGGATTCAGTGATCGGTACGATGGC
AGGCTATCTCTGCCTTTGGAGCGTTTATCACCTTTTCCGCTTGCTGACAGGGAAAGAAGGCATGGGTTACGGAGACTTTA
AATTGCTTGCGGCACTTGGAGCTTGGCTCGGCTGGCAATACCTACCGATGATCATCTTACTCTCTTCGGTTGTCGGGCTG
ATCTTTGGTCTCATTCAACTCAGATTGCAAAAACAAGGCATTGAGATGGCTTTTCCATTTGGGCCTTATCTGGCCATTGC
TGGTTGGGTCGCCTTGATGTGGGGAGATAGCTTGATGTCTTGGTATCTCAACTATCTTATAGGGGCATGA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (17-124)

• Type IV leader peptidase family (Peptidase_A24) (137-244)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Vibrio campbellii strain DS40M4	76.736	99.654	0.765
pilD	Vibrio cholerae strain A1552	70.833	99.654	0.706
pilD	Acinetobacter nosocomialis M2	55.235	95.848	0.529
pilD	Acinetobacter baumannii D1279779	53.986	95.502	0.516
pilD	Neisseria gonorrhoeae MS11	47.273	95.156	0.45