Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   MAQU_RS19155 Genome accession   NC_008740
Coordinates   4176056..4176448 (+) Length   130 a.a.
NCBI ID   WP_011787170.1    Uniprot ID   -
Organism   Marinobacter nauticus VT8     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4171056..4181448
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MAQU_RS19125 (Maqu_3761) - 4171338..4172348 (-) 1011 WP_011787164.1 aspartate carbamoyltransferase catalytic subunit -
  MAQU_RS19130 (Maqu_3762) pyrR 4172376..4172885 (-) 510 WP_011787165.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  MAQU_RS19135 (Maqu_3763) ruvX 4172905..4173336 (-) 432 WP_011787166.1 Holliday junction resolvase RuvX -
  MAQU_RS19140 (Maqu_3764) - 4173329..4173895 (-) 567 WP_011787167.1 YqgE/AlgH family protein -
  MAQU_RS19145 (Maqu_3765) - 4173892..4174758 (-) 867 WP_011787168.1 energy transducer TonB -
  MAQU_RS19150 (Maqu_3766) gshB 4174805..4175758 (-) 954 WP_011787169.1 glutathione synthase -
  MAQU_RS19155 (Maqu_3767) pilG 4176056..4176448 (+) 393 WP_011787170.1 twitching motility response regulator PilG Regulator
  MAQU_RS19160 (Maqu_3768) pilH 4176482..4176844 (+) 363 WP_011787171.1 twitching motility response regulator PilH -
  MAQU_RS19165 (Maqu_3769) - 4176865..4177410 (+) 546 WP_011787172.1 chemotaxis protein CheW -
  MAQU_RS19170 (Maqu_3770) - 4177504..4179579 (+) 2076 WP_011787173.1 methyl-accepting chemotaxis protein -
  MAQU_RS19175 (Maqu_3771) - 4179607..4180506 (+) 900 WP_011787174.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14627.92 Da        Isoelectric Point: 5.2241

>NTDB_id=27163 MAQU_RS19155 WP_011787170.1 4176056..4176448(+) (pilG) [Marinobacter nauticus VT8]
MDDNFENLKIMVIDDSKTIRRTAETLLKKVGCEVITATDGFDALAKIADSQPDIIFVDIMMPRLDGYQTCALIKNNSSFK
KTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLNTIRQYMPQAEQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=27163 MAQU_RS19155 WP_011787170.1 4176056..4176448(+) (pilG) [Marinobacter nauticus VT8]
ATGGATGACAACTTCGAGAACCTGAAGATCATGGTGATTGACGACAGCAAGACCATTCGTCGCACCGCGGAAACCCTTCT
TAAAAAGGTTGGCTGTGAGGTTATCACTGCCACAGACGGCTTTGACGCTCTGGCCAAGATTGCCGACTCCCAGCCGGACA
TCATTTTTGTCGATATCATGATGCCCCGCCTGGACGGCTACCAGACCTGCGCACTGATCAAGAACAATTCCTCTTTTAAA
AAGACGCCGGTTATCATGCTTTCGAGCAAGGACGGCCTGTTCGACAAGGCAAAAGGCCGAATCGTAGGCTCGGACCAGTA
TCTGACCAAACCGTTCAGCAAGGATGAACTACTTAACACCATCCGCCAATACATGCCTCAGGCGGAACAGTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.6

96.154

0.746
  vicR Streptococcus mutans UA159

41.803

93.846

0.392
  micA Streptococcus pneumoniae Cp1015

39.669

93.077

0.369
  pilH Synechocystis sp. PCC 6803

40.517

89.231

0.362

Multiple sequence alignment