Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | MAQU_RS03800 | Genome accession | NC_008740 |
| Coordinates | 848659..849183 (+) | Length | 174 a.a. |
| NCBI ID | WP_011784267.1 | Uniprot ID | A1TYM6 |
| Organism | Marinobacter nauticus VT8 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 843659..854183
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MAQU_RS03785 (Maqu_0745) | rplQ | 843773..844171 (+) | 399 | WP_011784264.1 | 50S ribosomal protein L17 | - |
| MAQU_RS03790 (Maqu_0746) | uvrA | 844244..847066 (-) | 2823 | WP_011784265.1 | excinuclease ABC subunit UvrA | - |
| MAQU_RS03795 (Maqu_0747) | - | 847231..848601 (+) | 1371 | WP_011784266.1 | MFS transporter | - |
| MAQU_RS03800 (Maqu_0748) | ssb | 848659..849183 (+) | 525 | WP_011784267.1 | single-stranded DNA-binding protein | Machinery gene |
| MAQU_RS03805 (Maqu_0749) | - | 849395..850321 (+) | 927 | WP_011784268.1 | hypothetical protein | - |
| MAQU_RS03810 (Maqu_0750) | - | 850321..850938 (+) | 618 | WP_011784269.1 | PilN domain-containing protein | - |
| MAQU_RS03815 (Maqu_0751) | - | 850935..851624 (+) | 690 | WP_011784270.1 | type II secretion system protein GspM | - |
| MAQU_RS03820 (Maqu_0752) | - | 851626..851955 (+) | 330 | WP_011784271.1 | hypothetical protein | - |
| MAQU_RS03825 (Maqu_0753) | mshL | 851952..853670 (+) | 1719 | WP_011784272.1 | pilus (MSHA type) biogenesis protein MshL | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 19101.17 Da Isoelectric Point: 4.9464
>NTDB_id=27146 MAQU_RS03800 WP_011784267.1 848659..849183(+) (ssb) [Marinobacter nauticus VT8]
MARGVNKVILIGNLGQDPDTRYTPNGNAVVNLNLATDESYKDRQTGQLVPKTEWHRVVLFGKVAEVAGQYLRKGSKVYIE
GKLQTRKWQNKEGQDVYTTEVVVDINGQMQMLDSRGSEGGMNQGAPQGRPQQQPQYNAPPQQGGQAGGYNNPAPQQQGGG
MPEPIDDFDDDIPF
MARGVNKVILIGNLGQDPDTRYTPNGNAVVNLNLATDESYKDRQTGQLVPKTEWHRVVLFGKVAEVAGQYLRKGSKVYIE
GKLQTRKWQNKEGQDVYTTEVVVDINGQMQMLDSRGSEGGMNQGAPQGRPQQQPQYNAPPQQGGQAGGYNNPAPQQQGGG
MPEPIDDFDDDIPF
Nucleotide
Download Length: 525 bp
>NTDB_id=27146 MAQU_RS03800 WP_011784267.1 848659..849183(+) (ssb) [Marinobacter nauticus VT8]
ATGGCACGAGGCGTAAACAAGGTAATTCTCATTGGTAACCTGGGGCAGGACCCGGACACTCGCTATACCCCCAACGGCAA
CGCTGTGGTTAACCTGAACCTCGCCACAGACGAGAGTTACAAGGATCGCCAGACCGGACAGCTGGTGCCGAAGACCGAGT
GGCATCGGGTTGTGCTGTTCGGCAAGGTGGCTGAAGTGGCTGGGCAATACCTGCGCAAAGGCTCCAAGGTCTACATTGAA
GGCAAGCTGCAGACCCGGAAATGGCAGAACAAGGAAGGGCAGGATGTCTACACCACCGAAGTGGTTGTGGATATCAATGG
CCAGATGCAGATGCTGGACAGCCGTGGTTCCGAGGGCGGTATGAATCAGGGGGCGCCCCAGGGACGGCCGCAGCAACAGC
CGCAATACAATGCGCCGCCCCAGCAGGGTGGGCAGGCTGGTGGCTACAACAACCCGGCACCCCAGCAGCAAGGTGGCGGC
ATGCCTGAGCCGATTGATGATTTTGATGACGATATTCCGTTCTGA
ATGGCACGAGGCGTAAACAAGGTAATTCTCATTGGTAACCTGGGGCAGGACCCGGACACTCGCTATACCCCCAACGGCAA
CGCTGTGGTTAACCTGAACCTCGCCACAGACGAGAGTTACAAGGATCGCCAGACCGGACAGCTGGTGCCGAAGACCGAGT
GGCATCGGGTTGTGCTGTTCGGCAAGGTGGCTGAAGTGGCTGGGCAATACCTGCGCAAAGGCTCCAAGGTCTACATTGAA
GGCAAGCTGCAGACCCGGAAATGGCAGAACAAGGAAGGGCAGGATGTCTACACCACCGAAGTGGTTGTGGATATCAATGG
CCAGATGCAGATGCTGGACAGCCGTGGTTCCGAGGGCGGTATGAATCAGGGGGCGCCCCAGGGACGGCCGCAGCAACAGC
CGCAATACAATGCGCCGCCCCAGCAGGGTGGGCAGGCTGGTGGCTACAACAACCCGGCACCCCAGCAGCAAGGTGGCGGC
ATGCCTGAGCCGATTGATGATTTTGATGACGATATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
57.714 |
100 |
0.58 |
| ssb | Glaesserella parasuis strain SC1401 |
54.054 |
100 |
0.575 |
| ssb | Neisseria meningitidis MC58 |
44.444 |
100 |
0.46 |
| ssb | Neisseria gonorrhoeae MS11 |
44.444 |
100 |
0.46 |