Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   C3Z10_RS01950 Genome accession   NZ_CP026610
Coordinates   388851..389249 (-) Length   132 a.a.
NCBI ID   WP_039252825.1    Uniprot ID   -
Organism   Bacillus velezensis strain CGMCC 11640     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 383851..394249
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C3Z10_RS01925 (C3Z10_01925) - 384023..385225 (+) 1203 WP_039252831.1 GTP-binding protein -
  C3Z10_RS01930 (C3Z10_01930) - 385290..386426 (+) 1137 WP_025284207.1 zinc-dependent alcohol dehydrogenase -
  C3Z10_RS01935 (C3Z10_01935) - 386441..386875 (+) 435 WP_012116767.1 RDD family protein -
  C3Z10_RS01940 (C3Z10_01940) - 386992..387270 (+) 279 WP_263612330.1 YckD family protein -
  C3Z10_RS01945 (C3Z10_01945) - 387374..388810 (+) 1437 WP_015416781.1 glycoside hydrolase family 1 protein -
  C3Z10_RS01950 (C3Z10_01950) nin/comJ 388851..389249 (-) 399 WP_039252825.1 competence protein ComJ Regulator
  C3Z10_RS01955 (C3Z10_01955) nucA/comI 389270..389707 (-) 438 WP_003156588.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  C3Z10_RS01960 (C3Z10_01960) hxlB 390065..390622 (-) 558 WP_039252823.1 6-phospho-3-hexuloisomerase -
  C3Z10_RS01965 (C3Z10_01965) hxlA 390619..391254 (-) 636 WP_015416785.1 3-hexulose-6-phosphate synthase -
  C3Z10_RS01970 (C3Z10_01970) - 391486..391848 (+) 363 WP_014304320.1 winged helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14993.97 Da        Isoelectric Point: 4.9712

>NTDB_id=270750 C3Z10_RS01950 WP_039252825.1 388851..389249(-) (nin/comJ) [Bacillus velezensis strain CGMCC 11640]
MNKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLFFHIPKGRYSLTCYSVPAEISDLHADTYIIDAASM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=270750 C3Z10_RS01950 WP_039252825.1 388851..389249(-) (nin/comJ) [Bacillus velezensis strain CGMCC 11640]
TTGAATAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTCCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTCATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCTCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

75.758

100

0.758

Multiple sequence alignment