Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   C3438_RS15645 Genome accession   NZ_CP026533
Coordinates   2994319..2994510 (+) Length   63 a.a.
NCBI ID   WP_017417446.1    Uniprot ID   A0AAP4DIH1
Organism   Bacillus velezensis strain DKU_NT_04     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2989319..2999510
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C3438_RS15610 (C3438_15610) argF 2990172..2991143 (+) 972 WP_017417442.1 ornithine carbamoyltransferase -
  C3438_RS15615 (C3438_15615) - 2991218..2991397 (+) 180 WP_003155070.1 YjzC family protein -
  C3438_RS15620 (C3438_15620) - 2991434..2991619 (-) 186 WP_007409129.1 YjzD family protein -
  C3438_RS15630 (C3438_15630) - 2991880..2992614 (+) 735 WP_014417405.1 hypothetical protein -
  C3438_RS15635 (C3438_15635) - 2992697..2993263 (+) 567 WP_025649580.1 hypothetical protein -
  C3438_RS15640 (C3438_15640) - 2993354..2994306 (+) 953 Protein_2985 BMP family ABC transporter substrate-binding protein -
  C3438_RS15645 (C3438_15645) comZ 2994319..2994510 (+) 192 WP_017417446.1 ComZ family protein Regulator
  C3438_RS15650 (C3438_15650) - 2994539..2994757 (-) 219 WP_007409123.1 hypothetical protein -
  C3438_RS15655 (C3438_15655) - 2994925..2995863 (+) 939 WP_007409122.1 beta-ketoacyl-ACP synthase III -
  C3438_RS15660 (C3438_15660) fabF 2995886..2997124 (+) 1239 WP_012117277.1 beta-ketoacyl-ACP synthase II -
  C3438_RS15665 (C3438_15665) - 2997208..2997993 (+) 786 WP_017417447.1 DUF2268 domain-containing protein -
  C3438_RS15670 (C3438_15670) - 2998167..2999153 (+) 987 WP_017417448.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7219.37 Da        Isoelectric Point: 4.2259

>NTDB_id=270175 C3438_RS15645 WP_017417446.1 2994319..2994510(+) (comZ) [Bacillus velezensis strain DKU_NT_04]
MQHEKSLEFMQIAMKYLLEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=270175 C3438_RS15645 WP_017417446.1 2994319..2994510(+) (comZ) [Bacillus velezensis strain DKU_NT_04]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCTGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

84.483

92.063

0.778

Multiple sequence alignment