Detailed information    

insolico Bioinformatically predicted

Overview

Name   vraR   Type   Regulator
Locus tag   DD548_RS05770 Genome accession   NZ_CP031673
Coordinates   1048455..1049078 (+) Length   207 a.a.
NCBI ID   WP_117224557.1    Uniprot ID   -
Organism   Staphylococcus aureus strain MOZ66     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1043455..1054078
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DD548_RS05750 (DD548_05750) - 1043898..1044293 (+) 396 WP_000901021.1 hypothetical protein -
  DD548_RS05755 (DD548_05755) fumC 1044489..1045874 (+) 1386 WP_000116224.1 class II fumarate hydratase -
  DD548_RS05760 (DD548_05760) - 1046337..1047158 (-) 822 WP_000669376.1 RluA family pseudouridine synthase -
  DD548_RS05765 (DD548_05765) - 1047321..1048433 (+) 1113 WP_000437967.1 GAF domain-containing sensor histidine kinase -
  DD548_RS05770 (DD548_05770) vraR 1048455..1049078 (+) 624 WP_117224557.1 response regulator Regulator
  DD548_RS05775 (DD548_05775) - 1049434..1049898 (+) 465 WP_000375864.1 XRE family transcriptional regulator XdrA -
  DD548_RS05780 (DD548_05780) - 1050077..1051201 (+) 1125 WP_000992527.1 DUF445 domain-containing protein -
  DD548_RS05785 (DD548_05785) - 1051270..1051614 (+) 345 WP_000290301.1 YlbF/YmcA family competence regulator -
  DD548_RS05795 (DD548_05795) - 1051997..1052095 (+) 99 WP_001791795.1 hypothetical protein -
  DD548_RS05800 (DD548_05800) - 1052386..1053582 (+) 1197 WP_000238227.1 metallophosphoesterase family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23895.56 Da        Isoelectric Point: 5.5730

>NTDB_id=269352 DD548_RS05770 WP_117224557.1 1048455..1049078(+) (vraR) [Staphylococcus aureus strain MOZ66]
MNKVILVDDHYIVRQGLRFLLSTIENIEVLQDFADGETFLEYLKEHEHPDIVLLDLVMPGMNGIEITEYIKAHYPDIKVL
VLTSYVDDEHVISAINKGADGYEMKDVEPQQLIETIRRVMNGEKMIHPKAQDVFETVSQKPHYTNKLSKRELEVLREMVK
GKTNKEIAETLFVSEKTIKTHVSHIFSKLQVSDRTQAAIYAMENKLI

Nucleotide


Download         Length: 624 bp        

>NTDB_id=269352 DD548_RS05770 WP_117224557.1 1048455..1049078(+) (vraR) [Staphylococcus aureus strain MOZ66]
ATGAACAAAGTAATATTAGTAGATGACCATTATATTGTGCGACAAGGATTGCGATTTTTATTATCCACGATTGAAAACAT
AGAAGTTTTACAAGACTTTGCAGATGGAGAAACATTTTTAGAATATTTAAAAGAGCATGAGCACCCTGATATTGTGCTAT
TAGATTTAGTGATGCCTGGCATGAATGGTATTGAAATTACGGAATATATTAAGGCACATTATCCGGATATTAAAGTTTTG
GTATTAACAAGTTATGTTGATGATGAACATGTAATTTCAGCAATCAATAAAGGTGCTGATGGTTATGAAATGAAAGACGT
TGAGCCTCAGCAATTAATTGAAACTATTAGACGAGTTATGAACGGTGAAAAAATGATACATCCTAAGGCACAAGATGTAT
TCGAAACAGTTAGCCAAAAACCACACTACACGAATAAGTTGTCAAAGAGAGAACTTGAAGTGTTACGTGAAATGGTTAAA
GGTAAAACAAATAAAGAGATTGCAGAAACTTTATTTGTATCTGAAAAAACAATTAAAACACATGTCAGTCATATATTTAG
TAAATTACAAGTTAGCGATCGTACACAAGCAGCAATTTATGCAATGGAAAATAAGTTGATTTAG

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, luxR family (GerE)

(146-201)

Response regulator receiver domain (Response_reg)

(4-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraR Staphylococcus aureus N315

40.58

100

0.406
  degU Bacillus subtilis subsp. subtilis str. 168

35.135

100

0.377
  letA Legionella pneumophila str. Paris

35.714

100

0.362
  letA Legionella pneumophila strain ERS1305867

35.714

100

0.362

Multiple sequence alignment