Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   C3F22_RS15640 Genome accession   NZ_CP026420
Coordinates   3213566..3214705 (-) Length   379 a.a.
NCBI ID   WP_104426933.1    Uniprot ID   A0A2L0I979
Organism   Acinetobacter sp. ACNIH1     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3208566..3219705
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C3F22_RS15605 (C3F22_15615) - 3208834..3209439 (-) 606 WP_104426929.1 primosomal replication protein PriC -
  C3F22_RS15610 (C3F22_15620) - 3209604..3209981 (-) 378 WP_104426930.1 RcnB family protein -
  C3F22_RS15615 (C3F22_15625) - 3210190..3210735 (-) 546 WP_004780720.1 glutathione peroxidase -
  C3F22_RS15620 (C3F22_15630) - 3210910..3211455 (-) 546 WP_104426931.1 glutathione peroxidase -
  C3F22_RS15625 (C3F22_15635) - 3211647..3212558 (+) 912 WP_104426932.1 DMT family transporter -
  C3F22_RS15635 (C3F22_15645) - 3212956..3213525 (-) 570 WP_034171542.1 L-threonylcarbamoyladenylate synthase -
  C3F22_RS15640 (C3F22_15650) dprA 3213566..3214705 (-) 1140 WP_104426933.1 DNA-processing protein DprA Machinery gene
  C3F22_RS15645 (C3F22_15655) tsaP 3214763..3215917 (-) 1155 WP_104426934.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  C3F22_RS15650 (C3F22_15660) def 3216038..3216568 (+) 531 WP_004780730.1 peptide deformylase -
  C3F22_RS15655 (C3F22_15665) - 3216661..3217071 (+) 411 WP_104426935.1 DUF2946 family protein -
  C3F22_RS15660 (C3F22_15670) - 3217143..3219209 (+) 2067 WP_104426936.1 TonB-dependent copper receptor -

Sequence


Protein


Download         Length: 379 a.a.        Molecular weight: 42814.70 Da        Isoelectric Point: 6.8112

>NTDB_id=269243 C3F22_RS15640 WP_104426933.1 3213566..3214705(-) (dprA) [Acinetobacter sp. ACNIH1]
MLNSLSRVQLEILTLWYLVQHSLSSFYKISQHYSSLTTAIQPDQVPTWQALGIHANHVQRLKNFSLPESQQKFQRCLEKV
QRDSDFVLLYHDLHYPQQLSHYVDKPPIIFGQGQPDTLLQAQIAVVGSRKPSPHGWQVAYDFSFYLSEQGFYINSGLAQG
IDEAAHRAGLKHQGTIAVMGTGLDQTYPSQHAQLRQEIIAHGGAVITEFLPETLPLQHHFPRRNRIVSGLSLGVIVAEAT
LKSGSLITAKLAAEQGKTVFAIPGHIYSEYHKGCHQLIREGTILIDHPQQVIEELALATQWQALQNEVQHDMADELPTHI
PPHLLRLYNQLDWVGQDLDHLSHHLQQDVSSLTGQLMELELLGFCTQQAGMYLRCRPHK

Nucleotide


Download         Length: 1140 bp        

>NTDB_id=269243 C3F22_RS15640 WP_104426933.1 3213566..3214705(-) (dprA) [Acinetobacter sp. ACNIH1]
ATGCTGAACTCTTTATCACGCGTGCAACTGGAAATACTGACGTTATGGTATCTGGTTCAGCATTCTCTTTCGAGTTTCTA
TAAAATCAGTCAGCATTATTCAAGTCTGACCACAGCCATACAGCCTGATCAGGTGCCTACCTGGCAGGCGCTTGGCATTC
ATGCCAATCATGTCCAACGCTTAAAAAACTTCTCGCTTCCAGAATCACAACAGAAATTTCAGCGCTGCCTGGAAAAAGTT
CAGCGAGATAGTGATTTTGTTCTACTCTACCATGATCTGCACTATCCGCAGCAACTCAGCCACTATGTAGACAAACCACC
GATTATTTTTGGCCAAGGTCAGCCGGATACTCTGCTACAAGCCCAAATTGCAGTTGTGGGAAGTCGCAAGCCGAGTCCTC
ATGGCTGGCAAGTAGCTTATGATTTTTCCTTTTATTTGAGTGAACAGGGTTTCTATATTAATAGTGGATTAGCACAAGGC
ATAGATGAAGCTGCTCATCGGGCAGGATTAAAACATCAGGGAACCATTGCAGTGATGGGAACCGGACTGGATCAGACCTA
CCCTTCTCAACATGCACAATTGCGCCAGGAGATTATTGCGCATGGTGGTGCCGTCATTACCGAGTTTCTACCAGAAACCC
TACCGTTGCAGCATCACTTTCCACGGCGTAACAGGATTGTCAGTGGCTTAAGTCTCGGGGTCATTGTGGCTGAAGCGACC
TTAAAAAGCGGCTCTCTGATTACGGCCAAACTGGCTGCCGAACAAGGCAAGACTGTATTTGCCATTCCGGGACATATTTA
TAGTGAATATCATAAAGGTTGCCATCAGCTGATTCGTGAAGGCACGATTCTGATTGATCACCCGCAACAGGTGATTGAAG
AACTGGCTCTGGCAACCCAATGGCAAGCCTTACAAAATGAAGTACAACATGACATGGCGGATGAACTTCCTACACACATA
CCGCCCCATTTGCTCAGACTTTATAACCAGCTGGACTGGGTCGGACAGGATCTGGATCATCTCAGTCATCATCTGCAACA
GGATGTTTCTTCTCTCACCGGTCAATTGATGGAACTGGAGCTACTTGGCTTTTGCACCCAGCAAGCCGGCATGTATCTAC
GTTGTCGTCCGCATAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2L0I979

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

62.234

99.208

0.617

  dprA Acinetobacter baumannii D1279779

61.436

99.208

0.609

  dprA Acinetobacter baylyi ADP1

58.421

100

0.586


Multiple sequence alignment