Detailed information
Bioinformatically predicted
Overview
| Name | comN | Type | Machinery gene |
| Locus tag | C3F22_RS00250 | Genome accession | NZ_CP026420 |
| Coordinates | 49517..50155 (+) | Length | 212 a.a. |
| NCBI ID | WP_005233586.1 | Uniprot ID | A0A2L0I1Q6 |
| Organism | Acinetobacter sp. ACNIH1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 44517..55155
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C3F22_RS00235 (C3F22_00235) | - | 44902..45705 (+) | 804 | WP_005233583.1 | putative RNA methyltransferase | - |
| C3F22_RS00240 (C3F22_00240) | ponA | 45764..48292 (-) | 2529 | WP_104425611.1 | penicillin-binding protein PBP1a | - |
| C3F22_RS00245 (C3F22_00245) | pilM | 48459..49517 (+) | 1059 | WP_104425612.1 | pilus assembly protein PilM | Machinery gene |
| C3F22_RS00250 (C3F22_00250) | comN | 49517..50155 (+) | 639 | WP_005233586.1 | PilN domain-containing protein | Machinery gene |
| C3F22_RS00255 (C3F22_00255) | pilO | 50152..50868 (+) | 717 | WP_104425613.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| C3F22_RS00260 (C3F22_00260) | pilP | 50868..51395 (+) | 528 | WP_034169727.1 | pilus assembly protein PilP | Machinery gene |
| C3F22_RS00265 (C3F22_00265) | pilQ | 51412..53577 (+) | 2166 | WP_104425614.1 | type IV pilus secretin PilQ | Machinery gene |
| C3F22_RS00270 (C3F22_00270) | aroK | 53614..54150 (+) | 537 | WP_104425615.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 212 a.a. Molecular weight: 23734.91 Da Isoelectric Point: 4.7909
>NTDB_id=269211 C3F22_RS00250 WP_005233586.1 49517..50155(+) (comN) [Acinetobacter sp. ACNIH1]
MAKINLLPWRDELRIKRNNEFVAICAGALFLGLAAAGSTWFYYDQKLQDQEQANQLVVSTNQNLDVQLKALDGLQDQRNA
IVERMKLIQGLQTQRPIAVHLIDEIVRVTPSNMYITKFQRTGDKFTIEGKAESPNTVAELLRNLEASTWYRNAFMNAFLV
AEEPKDKAPSSVIPRVEESYGSFTVTVDLDQIAEPTLKEGQTPATTTAEASS
MAKINLLPWRDELRIKRNNEFVAICAGALFLGLAAAGSTWFYYDQKLQDQEQANQLVVSTNQNLDVQLKALDGLQDQRNA
IVERMKLIQGLQTQRPIAVHLIDEIVRVTPSNMYITKFQRTGDKFTIEGKAESPNTVAELLRNLEASTWYRNAFMNAFLV
AEEPKDKAPSSVIPRVEESYGSFTVTVDLDQIAEPTLKEGQTPATTTAEASS
Nucleotide
Download Length: 639 bp
>NTDB_id=269211 C3F22_RS00250 WP_005233586.1 49517..50155(+) (comN) [Acinetobacter sp. ACNIH1]
ATGGCAAAGATTAACTTACTCCCTTGGCGCGATGAGCTAAGAATTAAAAGAAATAATGAATTTGTAGCGATTTGCGCAGG
GGCACTTTTTCTAGGATTGGCAGCAGCAGGTTCAACCTGGTTCTACTATGATCAAAAACTTCAGGATCAGGAACAGGCCA
ACCAGCTGGTGGTCAGTACTAACCAGAATCTGGATGTACAGCTGAAAGCATTGGATGGCTTACAAGACCAGCGTAATGCA
ATTGTTGAACGTATGAAGCTGATTCAGGGTTTACAGACTCAACGACCGATCGCAGTCCACCTGATTGATGAAATTGTACG
GGTCACACCAAGCAATATGTACATTACCAAATTTCAGCGTACCGGCGATAAATTCACTATTGAAGGTAAGGCAGAAAGTC
CGAATACAGTGGCTGAATTGCTACGTAATCTGGAGGCTTCTACCTGGTATCGTAATGCATTTATGAATGCTTTCCTGGTT
GCTGAAGAACCAAAAGATAAAGCGCCATCATCAGTGATTCCTCGAGTGGAAGAATCTTATGGCAGCTTTACGGTCACGGT
TGATCTGGATCAAATCGCTGAGCCAACACTTAAAGAAGGACAAACACCAGCCACAACTACAGCGGAGGCATCATCATGA
ATGGCAAAGATTAACTTACTCCCTTGGCGCGATGAGCTAAGAATTAAAAGAAATAATGAATTTGTAGCGATTTGCGCAGG
GGCACTTTTTCTAGGATTGGCAGCAGCAGGTTCAACCTGGTTCTACTATGATCAAAAACTTCAGGATCAGGAACAGGCCA
ACCAGCTGGTGGTCAGTACTAACCAGAATCTGGATGTACAGCTGAAAGCATTGGATGGCTTACAAGACCAGCGTAATGCA
ATTGTTGAACGTATGAAGCTGATTCAGGGTTTACAGACTCAACGACCGATCGCAGTCCACCTGATTGATGAAATTGTACG
GGTCACACCAAGCAATATGTACATTACCAAATTTCAGCGTACCGGCGATAAATTCACTATTGAAGGTAAGGCAGAAAGTC
CGAATACAGTGGCTGAATTGCTACGTAATCTGGAGGCTTCTACCTGGTATCGTAATGCATTTATGAATGCTTTCCTGGTT
GCTGAAGAACCAAAAGATAAAGCGCCATCATCAGTGATTCCTCGAGTGGAAGAATCTTATGGCAGCTTTACGGTCACGGT
TGATCTGGATCAAATCGCTGAGCCAACACTTAAAGAAGGACAAACACCAGCCACAACTACAGCGGAGGCATCATCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comN | Acinetobacter baylyi ADP1 |
70.531 |
97.642 |
0.689 |
| pilN | Acinetobacter baumannii D1279779 |
68.293 |
96.698 |
0.66 |