Detailed information NTG0269150

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: C3F36_RS11300
• Genome accession: NZ_CP026406
• Coordinates: 2410267..2411382 (+)
• Length: 371 a.a.
• NCBI ID: WP_104455089.1
• Uniprot ID: -
• Organism: Aeromonas sp. ASNIH2
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2405267..2416382

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C3F36_RS11280 (C3F36_11280)	rsmB	2406246..2407538 (-)	1293	WP_010672505.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
C3F36_RS11285 (C3F36_11285)	fmt	2407599..2408543 (-)	945	WP_010672506.1	methionyl-tRNA formyltransferase	-
C3F36_RS11290 (C3F36_11290)	def	2408556..2409068 (-)	513	WP_010672507.1	peptide deformylase	-
C3F36_RS11295 (C3F36_11295)	-	2409177..2410265 (+)	1089	WP_104455088.1	LysM peptidoglycan-binding domain-containing protein	-
C3F36_RS11300 (C3F36_11300)	dprA	2410267..2411382 (+)	1116	WP_104455089.1	DNA-processing protein DprA	Machinery gene
C3F36_RS11305 (C3F36_11305)	-	2411375..2411848 (+)	474	WP_010672510.1	DUF494 family protein	-
C3F36_RS11310 (C3F36_11310)	-	2411903..2412460 (+)	558	WP_104455090.1	topoisomerase DNA-binding C4 zinc finger domain-containing protein	-
C3F36_RS11315 (C3F36_11315)	-	2412734..2413294 (+)	561	WP_039039520.1	Sua5/YciO/YrdC/YwlC family protein	-
C3F36_RS11320 (C3F36_11320)	hemF	2413395..2414303 (+)	909	WP_104455091.1	oxygen-dependent coproporphyrinogen oxidase	-
C3F36_RS11325 (C3F36_11325)	aroE	2414406..2415227 (+)	822	WP_041214090.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 371 a.a.
• Molecular weight: 39090.84 Da
• Isoelectric Point: 4.9190

>NTDB_id=269150 C3F36_RS11300 WP_104455089.1 2410267..2411382(+) (dprA) [Aeromonas sp. ASNIH2]
MSLPLERLSLWLTLDAVTGIGPVTAARLLAHVGGDITTLFDSDDGALRALGLQSAQIQQMRWPLPVVEQGLSWAAEPGNH
LLCPDDPAYPALLKEISGAPLLLYCRGNVSSLSLPQLAMVGTRHPTYAGKDNATRLCAELVGCGLAITSGLALGIDGVCH
QQALASGGITLAVLGSGLDCLYPKRHQGLAMQILEQEGLLVSELAPQQGPLAEHFPRRNRIISGLSLGTLVVEAAEQSGS
LITARYALEQGREVFAVPGAPQNAQAAGCNRLLQQGAKLVLNAADILEEFPRLVLPPGPANGSSEAQHNSELPYADLLDN
VDYETTSVDTVAERARLPVDVVLGRLVELELVGAVMAVAGGYVRARRANHV

Nucleotide

• Length: 1116 bp

>NTDB_id=269150 C3F36_RS11300 WP_104455089.1 2410267..2411382(+) (dprA) [Aeromonas sp. ASNIH2]
GTGTCCTTGCCACTGGAGCGGTTGTCGCTATGGCTGACGCTGGATGCCGTTACAGGCATAGGCCCGGTCACCGCCGCTCG
CCTGTTGGCTCATGTGGGTGGTGACATCACAACTCTGTTTGACTCAGACGATGGCGCCCTGCGAGCTCTTGGTCTGCAGA
GTGCCCAGATTCAGCAGATGAGATGGCCTCTTCCTGTCGTGGAGCAGGGATTGAGCTGGGCCGCCGAGCCCGGCAATCAC
CTCCTCTGTCCCGATGACCCCGCATATCCTGCCCTGCTTAAAGAGATTTCCGGCGCCCCGCTCTTGCTCTACTGCCGCGG
GAACGTCTCATCCCTCTCCCTGCCACAGTTGGCGATGGTGGGTACCCGCCACCCCACCTATGCCGGCAAAGACAATGCGA
CACGCTTGTGTGCCGAGTTGGTGGGCTGTGGTCTGGCGATCACCTCCGGCCTCGCGTTGGGCATCGATGGCGTCTGCCAT
CAGCAGGCGCTGGCATCGGGCGGAATCACCCTGGCGGTGCTGGGATCCGGTCTGGATTGTCTCTACCCCAAGCGTCATCA
GGGGTTGGCGATGCAGATCCTCGAGCAGGAAGGTCTGCTTGTCTCCGAGTTGGCGCCCCAGCAAGGCCCCCTGGCTGAAC
ACTTCCCTCGCCGCAACCGTATCATCAGTGGTCTGTCGCTGGGGACACTGGTGGTGGAAGCGGCAGAACAGAGTGGTTCG
CTCATTACGGCCCGTTATGCGCTGGAGCAGGGCCGCGAGGTCTTTGCCGTTCCCGGCGCCCCGCAAAATGCACAGGCAGC
AGGGTGCAACCGTCTGCTTCAACAGGGTGCCAAGCTGGTCTTGAATGCCGCCGATATCCTGGAAGAGTTTCCAAGGCTGG
TCTTGCCCCCTGGACCCGCCAACGGTTCTTCCGAGGCGCAGCATAATAGCGAATTGCCTTATGCCGATTTGTTGGATAAC
GTAGATTATGAGACCACGAGCGTGGATACCGTTGCCGAACGGGCCCGGCTTCCTGTCGATGTCGTACTGGGCAGGTTGGT
AGAGCTGGAGCTGGTTGGTGCAGTGATGGCGGTAGCCGGTGGATACGTCAGAGCGAGGAGGGCGAATCATGTTTGA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (308-361)

• DNA recombination-mediator protein A (DNA_processg_A) (77-281)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	47.48	100	0.482
dprA	Vibrio campbellii strain DS40M4	47.397	98.383	0.466
dprA	Legionella pneumophila strain ERS1305867	44.199	97.574	0.431
dprA	Haemophilus influenzae Rd KW20	46.064	92.453	0.426
dprA	Vibrio cholerae strain A1552	50.163	82.749	0.415