Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   Aba810CP_RS19000 Genome accession   NZ_CP026338
Coordinates   3894075..3895205 (+) Length   376 a.a.
NCBI ID   WP_031971973.1    Uniprot ID   A0A427R5R0
Organism   Acinetobacter baumannii strain 810CP     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 3889075..3900205
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Aba810CP_RS18975 (Aba810CP_18970) - 3889335..3889541 (-) 207 WP_000182542.1 hypothetical protein -
  Aba810CP_RS18980 (Aba810CP_18975) - 3889595..3891709 (-) 2115 WP_001120681.1 TonB-dependent copper receptor -
  Aba810CP_RS18985 (Aba810CP_18980) - 3891782..3892210 (-) 429 WP_000231981.1 DUF2946 family protein -
  Aba810CP_RS18990 (Aba810CP_18985) def 3892247..3892777 (-) 531 WP_001196539.1 peptide deformylase -
  Aba810CP_RS18995 (Aba810CP_18990) tsaP 3892900..3894054 (+) 1155 WP_000755271.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  Aba810CP_RS19000 (Aba810CP_18995) dprA 3894075..3895205 (+) 1131 WP_031971973.1 DNA-processing protein DprA Machinery gene
  Aba810CP_RS19005 (Aba810CP_19000) - 3895256..3895825 (+) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  Aba810CP_RS19010 (Aba810CP_19005) - 3896217..3897137 (-) 921 WP_000084546.1 DMT family transporter -
  Aba810CP_RS19015 (Aba810CP_19010) - 3897243..3897893 (-) 651 WP_001984979.1 TetR/AcrR family transcriptional regulator -
  Aba810CP_RS19020 (Aba810CP_19015) - 3898030..3899244 (+) 1215 WP_000372838.1 MFS transporter -
  Aba810CP_RS19025 (Aba810CP_19020) - 3899266..3900030 (+) 765 WP_000786954.1 AraC family transcriptional regulator -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41943.48 Da        Isoelectric Point: 6.4055

>NTDB_id=268349 Aba810CP_RS19000 WP_031971973.1 3894075..3895205(+) (dprA) [Acinetobacter baumannii strain 810CP]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIIDYFGNCEKATQPDGLAKWSSLGLHANHLKRVNEFQTPQGQTQFEQLVQQV
CQYTDFILTPDDSGYPTQLLPYTDHPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFFISSGLAYG
IDEAAHQGASTHQRTIAVTGTGLDTTYPAQNKKLAEYILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILIDHPEQIIEDLALPTQWQSQQQNQTEEANTNTPEIP
EHLIDLYQSLDWVGQNIDQLVVHHNIPVSELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=268349 Aba810CP_RS19000 WP_031971973.1 3894075..3895205(+) (dprA) [Acinetobacter baumannii strain 810CP]
ATGCTCACTCAACTTTCTTCACACCACTACCACACACTTAAAGTGTGGTATTTGGTGCAGCACTCTTTAGTCAGCTTTAA
AAAAATTATTGATTATTTTGGAAATTGTGAAAAAGCCACTCAACCTGATGGTTTAGCAAAGTGGTCCTCTCTGGGGCTAC
ATGCTAATCACTTAAAACGTGTAAACGAATTTCAAACGCCCCAAGGTCAGACGCAGTTTGAACAACTTGTACAACAAGTT
TGTCAGTATACGGATTTTATTTTAACGCCGGATGACTCTGGCTATCCCACTCAATTACTTCCTTATACAGATCATCCACC
TATTATTTTTGGGAAAGGTCAAGCGCAAGCTTTATTGCAACCTCAGATTGCGATTGTCGGTAGCCGAAAACCAAGCCCAC
ATGGACGACAGGTCGCTTATGATTTTGCTTACTACTTAAGTGAAAAGGGCTTTTTCATTAGTAGTGGTCTGGCTTATGGC
ATTGATGAAGCCGCACATCAAGGTGCATCTACTCATCAACGTACCATTGCAGTGACGGGTACGGGCTTAGACACTACTTA
TCCAGCTCAAAATAAAAAACTTGCAGAATATATTTTGGCTCAAAACGGCGCCATTATTACTGAGTTTTTACCGGGTACAC
CGCCATTACAACAGCATTTTCCACGTAGAAACCGAATTGTCAGCGGTTTGAGTTTAGGCGTTTTGGTGGTAGAAGCGACA
TTAAAAAGTGGCTCACTCATCACGGCCAATAAAGCTGCTGAACAAGGTAAAACCGTATTCGCGATTCCGGGCCATATTTA
TAGCGAGTTTCATCAAGGATGCCATCAACTTATCCGTGAAGGTGCAATTTTAATCGACCATCCTGAACAGATTATTGAGG
ATCTTGCTTTACCAACCCAATGGCAAAGTCAGCAACAAAATCAAACTGAAGAAGCTAATACGAATACTCCAGAAATTCCT
GAGCATTTGATTGACCTTTATCAGTCTTTAGACTGGGTGGGACAAAATATTGACCAACTTGTAGTTCACCATAATATTCC
AGTTTCTGAACTGACCTCTTCACTAATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGGCTGTATTTACGTT
GTCGTTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A427R5R0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

98.404

100

0.984

  dprA Acinetobacter baumannii strain A118

98.138

100

0.981

  dprA Acinetobacter baylyi ADP1

70.079

100

0.71

  dprA Vibrio cholerae strain A1552

43.202

88.032

0.38


Multiple sequence alignment