Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BAOM_RS17370 | Genome accession | NZ_CP026095 |
| Coordinates | 3522801..3523844 (-) | Length | 347 a.a. |
| NCBI ID | WP_127761365.1 | Uniprot ID | A0A3Q9RPP5 |
| Organism | Peribacillus asahii strain OM18 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3517801..3528844
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BAOM_RS17330 (BAOM_3755) | - | 3518608..3519402 (+) | 795 | WP_127761358.1 | YqhG family protein | - |
| BAOM_RS17335 (BAOM_3756) | - | 3519482..3519679 (-) | 198 | WP_119115514.1 | YqzE family protein | - |
| BAOM_RS17340 (BAOM_3757) | comGG | 3519909..3520289 (-) | 381 | WP_127761359.1 | competence type IV pilus minor pilin ComGG | - |
| BAOM_RS17345 (BAOM_3758) | comGF | 3520279..3520725 (-) | 447 | WP_127761360.1 | competence type IV pilus minor pilin ComGF | - |
| BAOM_RS17350 (BAOM_3759) | - | 3520709..3521047 (-) | 339 | WP_127761361.1 | hypothetical protein | - |
| BAOM_RS17355 (BAOM_3760) | comGD | 3521034..3521468 (-) | 435 | WP_127761362.1 | competence type IV pilus minor pilin ComGD | - |
| BAOM_RS17360 (BAOM_3761) | comGC | 3521455..3521793 (-) | 339 | WP_127761363.1 | competence type IV pilus major pilin ComGC | - |
| BAOM_RS17365 (BAOM_3762) | comGB | 3521783..3522835 (-) | 1053 | WP_127761364.1 | competence type IV pilus assembly protein ComGB | - |
| BAOM_RS17370 (BAOM_3763) | comGA | 3522801..3523844 (-) | 1044 | WP_127761365.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BAOM_RS17375 (BAOM_3764) | - | 3524295..3524996 (+) | 702 | WP_127761366.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| BAOM_RS17380 (BAOM_3765) | - | 3525083..3525325 (+) | 243 | WP_127761367.1 | DUF2626 domain-containing protein | - |
| BAOM_RS17385 (BAOM_3766) | - | 3525371..3526447 (-) | 1077 | WP_127761368.1 | class I SAM-dependent methyltransferase | - |
| BAOM_RS17390 (BAOM_3767) | - | 3526528..3527697 (-) | 1170 | WP_252282574.1 | M20 family metallopeptidase | - |
| BAOM_RS17395 (BAOM_3768) | - | 3527743..3528366 (-) | 624 | WP_127761370.1 | MBL fold metallo-hydrolase | - |
| BAOM_RS17400 (BAOM_3769) | - | 3528578..3528751 (+) | 174 | WP_119115525.1 | DUF2759 domain-containing protein | - |
Sequence
Protein
Download Length: 347 a.a. Molecular weight: 38989.05 Da Isoelectric Point: 9.1414
>NTDB_id=267072 BAOM_RS17370 WP_127761365.1 3522801..3523844(-) (comGA) [Peribacillus asahii strain OM18]
MSIEKTADDILKRAIRLAASDIHILPRKEGPLVRFRIDNRLIPQENLSFEETERLISHLKYLASMDIGEKRRPQNGSITL
HLEDRVIGLRLSTLPTAYVESLAIRLIPQQNILPLNQLSLFPTTTERLISLLKHSHGMIIFTGPTGSGKTTTLYSILHHV
QELYNRHVITLEDPIENQSENVLQVQINEKAGITYSVGLKAALRHDPDVIMVGEIRDSETAKIAIRAALTGHLLLTTMHS
RDAAGAISRLLEFGVSWLEIEQSLIAVTAQRLVELRNRRTVGGAANKRASVYELLYGRDLVKVLQGVKGENIEARHRTLK
EEIGKAVAMGFVENKEFERLVFIDERG
MSIEKTADDILKRAIRLAASDIHILPRKEGPLVRFRIDNRLIPQENLSFEETERLISHLKYLASMDIGEKRRPQNGSITL
HLEDRVIGLRLSTLPTAYVESLAIRLIPQQNILPLNQLSLFPTTTERLISLLKHSHGMIIFTGPTGSGKTTTLYSILHHV
QELYNRHVITLEDPIENQSENVLQVQINEKAGITYSVGLKAALRHDPDVIMVGEIRDSETAKIAIRAALTGHLLLTTMHS
RDAAGAISRLLEFGVSWLEIEQSLIAVTAQRLVELRNRRTVGGAANKRASVYELLYGRDLVKVLQGVKGENIEARHRTLK
EEIGKAVAMGFVENKEFERLVFIDERG
Nucleotide
Download Length: 1044 bp
>NTDB_id=267072 BAOM_RS17370 WP_127761365.1 3522801..3523844(-) (comGA) [Peribacillus asahii strain OM18]
ATGTCTATTGAAAAAACGGCAGATGATATTTTGAAGCGTGCTATCAGGTTAGCTGCATCAGATATTCATATTTTGCCTCG
CAAAGAAGGTCCACTCGTTCGATTTCGAATCGATAATCGACTCATTCCCCAAGAAAATCTCTCTTTTGAAGAAACAGAAC
GTCTTATCTCTCATCTAAAATATCTCGCATCAATGGATATCGGTGAAAAAAGAAGACCCCAAAACGGTTCGATTACGCTT
CATTTAGAAGATCGAGTGATCGGACTTAGATTATCAACATTACCTACAGCATATGTTGAAAGTTTAGCCATTCGTTTAAT
TCCCCAGCAAAACATTCTGCCACTTAACCAACTCTCTCTTTTTCCAACCACTACCGAGCGATTGATTTCTCTTTTAAAGC
ACTCACATGGAATGATTATTTTCACAGGTCCGACTGGATCAGGTAAAACGACAACGCTGTACTCCATCCTTCATCATGTG
CAGGAATTGTATAACCGCCATGTTATTACTCTTGAAGATCCTATCGAAAATCAATCCGAAAACGTATTGCAAGTTCAAAT
TAATGAGAAAGCGGGAATTACGTATTCAGTCGGCTTAAAGGCAGCTTTACGTCACGATCCTGATGTGATTATGGTGGGAG
AAATTCGTGATTCAGAAACAGCTAAAATAGCGATTAGGGCGGCACTTACAGGCCATTTACTGTTAACAACGATGCATAGC
CGCGATGCCGCAGGAGCTATTTCACGGCTGTTAGAGTTTGGTGTAAGTTGGTTAGAAATTGAACAAAGTTTAATTGCTGT
AACGGCACAACGTTTAGTCGAATTAAGAAATCGAAGAACAGTAGGCGGTGCTGCAAATAAGCGAGCAAGTGTGTATGAAC
TTCTTTATGGAAGAGATTTAGTGAAAGTGTTACAAGGAGTAAAAGGAGAGAATATTGAAGCTCGCCATCGAACGTTGAAA
GAAGAAATCGGTAAAGCTGTAGCGATGGGCTTTGTCGAGAACAAAGAATTTGAAAGATTGGTATTTATTGATGAGAGGGG
GTAA
ATGTCTATTGAAAAAACGGCAGATGATATTTTGAAGCGTGCTATCAGGTTAGCTGCATCAGATATTCATATTTTGCCTCG
CAAAGAAGGTCCACTCGTTCGATTTCGAATCGATAATCGACTCATTCCCCAAGAAAATCTCTCTTTTGAAGAAACAGAAC
GTCTTATCTCTCATCTAAAATATCTCGCATCAATGGATATCGGTGAAAAAAGAAGACCCCAAAACGGTTCGATTACGCTT
CATTTAGAAGATCGAGTGATCGGACTTAGATTATCAACATTACCTACAGCATATGTTGAAAGTTTAGCCATTCGTTTAAT
TCCCCAGCAAAACATTCTGCCACTTAACCAACTCTCTCTTTTTCCAACCACTACCGAGCGATTGATTTCTCTTTTAAAGC
ACTCACATGGAATGATTATTTTCACAGGTCCGACTGGATCAGGTAAAACGACAACGCTGTACTCCATCCTTCATCATGTG
CAGGAATTGTATAACCGCCATGTTATTACTCTTGAAGATCCTATCGAAAATCAATCCGAAAACGTATTGCAAGTTCAAAT
TAATGAGAAAGCGGGAATTACGTATTCAGTCGGCTTAAAGGCAGCTTTACGTCACGATCCTGATGTGATTATGGTGGGAG
AAATTCGTGATTCAGAAACAGCTAAAATAGCGATTAGGGCGGCACTTACAGGCCATTTACTGTTAACAACGATGCATAGC
CGCGATGCCGCAGGAGCTATTTCACGGCTGTTAGAGTTTGGTGTAAGTTGGTTAGAAATTGAACAAAGTTTAATTGCTGT
AACGGCACAACGTTTAGTCGAATTAAGAAATCGAAGAACAGTAGGCGGTGCTGCAAATAAGCGAGCAAGTGTGTATGAAC
TTCTTTATGGAAGAGATTTAGTGAAAGTGTTACAAGGAGTAAAAGGAGAGAATATTGAAGCTCGCCATCGAACGTTGAAA
GAAGAAATCGGTAAAGCTGTAGCGATGGGCTTTGTCGAGAACAAAGAATTTGAAAGATTGGTATTTATTGATGAGAGGGG
GTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
53.429 |
100 |
0.539 |
| pilB | Haemophilus influenzae 86-028NP |
39.053 |
97.406 |
0.38 |
| pilB | Haemophilus influenzae Rd KW20 |
38.166 |
97.406 |
0.372 |
| pilB | Glaesserella parasuis strain SC1401 |
42.333 |
86.455 |
0.366 |