Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | LPC_RS04475 | Genome accession | NC_009494 |
| Coordinates | 996097..996414 (+) | Length | 105 a.a. |
| NCBI ID | WP_011945930.1 | Uniprot ID | - |
| Organism | Legionella pneumophila str. Corby | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 991097..1001414
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPC_RS04455 (LPC_2489) | - | 991249..992688 (+) | 1440 | WP_010946542.1 | cation:proton antiporter | - |
| LPC_RS04460 (LPC_2488) | nadC | 992685..993527 (+) | 843 | WP_011945928.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| LPC_RS04465 (LPC_2487) | - | 993524..994615 (+) | 1092 | WP_011945929.1 | undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | - |
| LPC_RS04470 (LPC_2486) | - | 994590..996005 (+) | 1416 | WP_010946545.1 | M20 family metallopeptidase | - |
| LPC_RS04475 (LPC_2485) | comEA | 996097..996414 (+) | 318 | WP_011945930.1 | ComEA family DNA-binding protein | Machinery gene |
| LPC_RS04480 (LPC_2484) | - | 996610..997647 (+) | 1038 | WP_011213320.1 | rod shape-determining protein | - |
| LPC_RS04485 (LPC_2483) | mreC | 997625..998533 (+) | 909 | WP_010946548.1 | rod shape-determining protein MreC | - |
| LPC_RS04490 (LPC_2482) | mreD | 998530..999009 (+) | 480 | WP_011945932.1 | rod shape-determining protein MreD | - |
| LPC_RS04495 (LPC_2481) | - | 998945..999547 (-) | 603 | WP_013101203.1 | pseudouridine synthase | - |
| LPC_RS04500 (LPC_2480) | - | 999808..1000506 (+) | 699 | WP_011945934.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 11747.74 Da Isoelectric Point: 10.6194
>NTDB_id=26707 LPC_RS04475 WP_011945930.1 996097..996414(+) (comEA) [Legionella pneumophila str. Corby]
MKARLIAILLSFIVIPFSSQAENEPQKTPAKQVLVKGKINLNTADVHSLTGSFKGIGKKRAEAIIAYRENHQGFKSLEEL
AEVKGIGQRFVDKNREKLKEIFVIN
MKARLIAILLSFIVIPFSSQAENEPQKTPAKQVLVKGKINLNTADVHSLTGSFKGIGKKRAEAIIAYRENHQGFKSLEEL
AEVKGIGQRFVDKNREKLKEIFVIN
Nucleotide
Download Length: 318 bp
>NTDB_id=26707 LPC_RS04475 WP_011945930.1 996097..996414(+) (comEA) [Legionella pneumophila str. Corby]
ATGAAAGCAAGACTCATTGCTATTTTGTTGTCATTTATTGTTATCCCTTTCTCTTCTCAAGCTGAGAACGAGCCTCAAAA
AACTCCAGCTAAACAAGTCCTTGTTAAGGGCAAGATTAATCTCAATACAGCGGATGTGCATTCTTTAACAGGCTCTTTTA
AAGGGATAGGAAAAAAACGGGCTGAAGCTATTATTGCTTATAGAGAGAATCATCAAGGCTTTAAATCTCTGGAAGAGCTT
GCGGAAGTCAAGGGTATAGGGCAGCGTTTTGTAGATAAAAATAGAGAAAAACTGAAAGAAATTTTCGTTATTAATTAA
ATGAAAGCAAGACTCATTGCTATTTTGTTGTCATTTATTGTTATCCCTTTCTCTTCTCAAGCTGAGAACGAGCCTCAAAA
AACTCCAGCTAAACAAGTCCTTGTTAAGGGCAAGATTAATCTCAATACAGCGGATGTGCATTCTTTAACAGGCTCTTTTA
AAGGGATAGGAAAAAAACGGGCTGAAGCTATTATTGCTTATAGAGAGAATCATCAAGGCTTTAAATCTCTGGAAGAGCTT
GCGGAAGTCAAGGGTATAGGGCAGCGTTTTGTAGATAAAAATAGAGAAAAACTGAAAGAAATTTTCGTTATTAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Legionella pneumophila str. Paris |
99.048 |
100 |
0.99 |
| comEA | Legionella pneumophila strain ERS1305867 |
99.048 |
100 |
0.99 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
35.455 |
100 |
0.371 |
| comEA | Staphylococcus aureus N315 |
38.384 |
94.286 |
0.362 |
| comEA | Staphylococcus aureus MW2 |
38.384 |
94.286 |
0.362 |