Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | C2H97_RS00175 | Genome accession | NZ_CP026038 |
| Coordinates | 27881..28216 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis PY79 strain PK1_3 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 22881..33216
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2H97_RS00155 (C2H97_00155) | gcvT | 23472..24560 (-) | 1089 | WP_038829737.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| C2H97_RS00160 (C2H97_00160) | yqhH | 25002..26675 (+) | 1674 | WP_120028360.1 | SNF2-related protein | - |
| C2H97_RS00165 (C2H97_00165) | yqhG | 26696..27490 (+) | 795 | WP_032726154.1 | YqhG family protein | - |
| C2H97_RS00170 (C2H97_00175) | sinI | 27674..27847 (+) | 174 | WP_014477323.1 | anti-repressor SinI | Regulator |
| C2H97_RS00175 (C2H97_00180) | sinR | 27881..28216 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| C2H97_RS00180 (C2H97_00185) | tasA | 28308..29093 (-) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| C2H97_RS00185 (C2H97_00190) | sipW | 29158..29730 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| C2H97_RS00190 (C2H97_00195) | tapA | 29714..30475 (-) | 762 | WP_120028361.1 | amyloid fiber anchoring/assembly protein TapA | - |
| C2H97_RS00195 (C2H97_00200) | yqzG | 30746..31072 (+) | 327 | WP_038829733.1 | YqzG/YhdC family protein | - |
| C2H97_RS00200 (C2H97_00205) | spoIIT | 31114..31293 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| C2H97_RS00205 (C2H97_00210) | comGG | 31365..31739 (-) | 375 | WP_032726157.1 | ComG operon protein ComGG | Machinery gene |
| C2H97_RS00210 (C2H97_00215) | comGF | 31740..32123 (-) | 384 | WP_070547529.1 | ComG operon protein ComGF | Machinery gene |
| C2H97_RS00215 (C2H97_00220) | comGE | 32149..32496 (-) | 348 | WP_070547530.1 | ComG operon protein 5 | Machinery gene |
| C2H97_RS00220 (C2H97_00225) | comGD | 32480..32911 (-) | 432 | WP_120028362.1 | comG operon protein ComGD | Machinery gene |
| C2H97_RS00225 (C2H97_00230) | comGC | 32901..33197 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=265739 C2H97_RS00175 WP_003226345.1 27881..28216(+) (sinR) [Bacillus subtilis PY79 strain PK1_3]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=265739 C2H97_RS00175 WP_003226345.1 27881..28216(+) (sinR) [Bacillus subtilis PY79 strain PK1_3]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCAATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCAATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |