Detailed information    

insolico Bioinformatically predicted

Overview

Name   uvrA   Type   Machinery gene
Locus tag   DLE02_RS18690 Genome accession   NZ_CP031383
Coordinates   3880676..3883510 (+) Length   944 a.a.
NCBI ID   WP_000083355.1    Uniprot ID   A0A0D8FGA4
Organism   Acinetobacter baumannii strain LUH 6011     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3875676..3888510
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DLE02_RS18660 (DLE02_03692) - 3875914..3876996 (-) 1083 WP_000680213.1 DUF475 domain-containing protein -
  DLE02_RS18665 (DLE02_03693) tenA 3877259..3877933 (+) 675 WP_000899418.1 thiaminase II -
  DLE02_RS18670 (DLE02_03694) - 3877983..3878324 (-) 342 WP_000263326.1 GlpM family protein -
  DLE02_RS18675 (DLE02_03695) - 3878377..3878730 (-) 354 WP_000580161.1 DUF1304 domain-containing protein -
  DLE02_RS18680 (DLE02_03696) - 3878796..3879773 (-) 978 WP_001256575.1 zinc-binding dehydrogenase -
  DLE02_RS18685 (DLE02_03697) - 3879777..3880379 (-) 603 WP_000826320.1 TetR/AcrR family transcriptional regulator -
  DLE02_RS18690 (DLE02_03698) uvrA 3880676..3883510 (+) 2835 WP_000083355.1 excinuclease ABC subunit UvrA Machinery gene
  DLE02_RS18695 (DLE02_03699) - 3883544..3885250 (-) 1707 WP_000016109.1 GGDEF domain-containing protein -
  DLE02_RS18700 (DLE02_03700) omp33-36 3886243..3887142 (+) 900 WP_000733005.1 porin Omp33-36 -

Sequence

Protein


Download         Length: 944 a.a.        Molecular weight: 104386.69 Da        Isoelectric Point: 6.5117

>NTDB_id=265744 DLE02_RS18690 WP_000083355.1 3880676..3883510(+) (uvrA) [Acinetobacter baumannii strain LUH 6011]
MSQSHIRIRGARTHNLKNVSLDIPRDKFVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSQMEKPEVDSIEG
LSPAIAIEQKSTSHNPRSTVGTITEIYDYLRLLYARVGTPYCPEHDLPMVAQTVSEMVDAVKNLEEGTALMLLAPVVRER
KGEYSNLFEQLQGQGFVRARVDGEIIDIDTPPELDKKKKHTIEVVVDRFKVRDDLGNRIAESFETALRLGGDIAVLSWMN
GEHPDRVFSAKHSCPECDRAVAELEPRLFSFNNPFGACPVCDGLGTRSHFSPEKLIPNPELAISEGAIRGWDRQRPYYYS
MLQKVADHFGFQLDTPWNQLDKDTQKKFLQGTGKEKIDLSYIDERGRKHTRVQPFEGILPHLERRYRETESNYVRDDLAQ
YLSNAACDACGGSRLNEISRHVRVKDKTIADITRMSIGDAESYYQGINLEGAKGEIADKIFKEIRERLHFLVSVGLNYLS
LARSAETLSGGEAQRIRLASQIGAGLMGVMYVLDEPSIGLHQRDNDRLLQTLIRLRDLGNTVLVVEHDEDAIRAADHIID
IGPGAGVHGGVVIAEGTYDELAKHADSLTGQYLSGKLKIEVPKQRTQPPKPEEKIKLSGAAGHNLKNVDLTIPLGIMTCV
TGVSGSGKSTLINRTLLPLAATQLNGATTLTAEKFDSIDGLQHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELFAQT
PEAKARGYSAGRFSFNVKGGRCEACEGDGMIKVAMHFLPDMYVPCDACHGKRYNRETLEVGYKGKNISDVLEMTVEDAAE
FFSAIPVIHRRLETLTQVGLGYIRLGQAATTLSGGEAQRVKLARELAKRDTGKTLYILDEPTTGLHFHDIAKLLDILHEL
RNKGNTIVVIEHNLDVIKTADWVVDLGPEGGSGGGMIIAEGTPEQVAEVEISHTGRFLKPMLKQ

Nucleotide


Download         Length: 2835 bp        

>NTDB_id=265744 DLE02_RS18690 WP_000083355.1 3880676..3883510(+) (uvrA) [Acinetobacter baumannii strain LUH 6011]
ATGAGCCAAAGTCATATCCGTATTCGAGGCGCACGCACCCATAACTTAAAAAATGTGTCACTCGATATTCCACGCGACAA
ATTTGTGGTAATTACGGGGCTATCAGGTTCAGGAAAATCTTCTCTTGCCTTTGATACCTTGTATGCCGAAGGACAGCGCC
GTTATGTCGAATCACTTTCGGCATATGCCCGTCAGTTTTTATCGCAAATGGAAAAACCTGAAGTCGACTCGATTGAAGGT
TTATCACCAGCCATTGCGATTGAGCAAAAGTCTACTAGCCATAACCCACGTTCAACGGTTGGTACGATTACCGAAATTTA
CGACTATTTGCGTCTGCTTTATGCACGTGTCGGTACGCCTTATTGCCCTGAACACGACTTACCTATGGTTGCGCAAACTG
TTTCTGAAATGGTCGATGCGGTAAAGAACCTTGAGGAAGGCACTGCACTCATGTTGCTTGCCCCTGTTGTTCGTGAGCGT
AAAGGTGAATACAGCAACTTGTTCGAACAACTACAAGGTCAAGGTTTTGTTCGTGCCCGTGTTGATGGTGAAATCATTGA
TATTGATACACCACCGGAACTCGACAAAAAGAAAAAACATACCATTGAAGTCGTTGTTGACCGCTTTAAAGTACGTGATG
ACTTAGGCAACCGTATTGCTGAATCATTTGAAACTGCACTACGTTTAGGTGGCGATATTGCAGTTTTATCGTGGATGAAT
GGCGAACACCCAGATCGCGTTTTTTCTGCAAAACACTCATGCCCTGAATGTGATCGCGCAGTCGCAGAGCTTGAGCCACG
TTTATTTTCATTTAACAACCCGTTTGGTGCGTGCCCTGTCTGTGATGGCTTAGGTACACGTAGCCATTTTAGCCCTGAAA
AACTCATTCCTAACCCTGAACTTGCAATTAGTGAAGGTGCTATTCGTGGTTGGGATCGTCAACGTCCTTATTACTATTCA
ATGCTGCAAAAAGTTGCCGACCATTTTGGTTTTCAACTTGATACACCTTGGAATCAGTTAGATAAAGACACGCAAAAGAA
ATTCTTACAAGGTACTGGCAAAGAAAAAATCGATTTAAGTTATATCGATGAACGTGGCCGTAAACATACACGCGTGCAAC
CTTTTGAAGGAATTTTGCCACACCTTGAGCGTCGCTATCGTGAAACTGAAAGTAACTATGTACGTGATGATTTAGCACAA
TATTTGTCTAATGCAGCTTGTGATGCATGTGGTGGTTCACGTCTCAATGAAATTTCACGTCATGTTCGTGTAAAAGATAA
AACCATTGCCGACATTACCCGCATGTCGATTGGTGATGCTGAAAGCTACTATCAAGGTATAAACCTTGAAGGTGCCAAAG
GTGAAATTGCAGATAAAATCTTTAAAGAGATTCGTGAGCGTTTACATTTCTTGGTGAGTGTTGGCCTGAACTATTTAAGT
CTGGCTCGTTCTGCCGAAACACTATCGGGTGGTGAAGCCCAGCGTATCCGTCTAGCTTCGCAAATTGGTGCAGGTTTGAT
GGGTGTCATGTACGTCCTTGATGAACCATCAATTGGTCTCCATCAACGTGATAATGACCGTTTATTACAAACGCTAATTC
GCTTACGTGATTTGGGCAATACGGTATTAGTCGTTGAACATGATGAAGATGCAATCCGTGCAGCTGACCATATTATTGAT
ATCGGCCCTGGTGCTGGCGTGCATGGTGGTGTTGTTATTGCTGAAGGTACGTATGATGAGCTGGCTAAACATGCCGACTC
ACTCACAGGTCAATATCTTTCAGGCAAACTCAAAATTGAAGTGCCAAAACAACGAACTCAACCACCTAAACCTGAAGAAA
AAATTAAACTTTCAGGTGCAGCGGGTCATAACTTAAAAAATGTCGATTTAACCATCCCACTTGGCATTATGACTTGTGTT
ACGGGTGTTTCAGGTTCAGGTAAATCAACACTGATTAACCGTACGTTACTTCCACTGGCTGCAACACAGCTCAACGGTGC
AACGACTTTAACAGCTGAAAAATTTGACTCGATTGATGGTCTACAACATCTGGATAAAGTCGTTGATATTGACCAAAGCC
CAATTGGCCGTACACCGCGCTCTAATCCAGCGACTTATACGGGTCTATTTACGCCAATTCGTGAATTATTTGCTCAAACA
CCAGAAGCGAAAGCGCGTGGTTATAGTGCGGGTCGTTTCTCGTTTAACGTAAAAGGTGGACGCTGCGAAGCGTGTGAAGG
CGACGGTATGATTAAAGTCGCAATGCACTTCTTACCAGACATGTATGTACCTTGCGATGCTTGTCATGGCAAACGTTATA
ACCGTGAAACACTTGAAGTCGGCTATAAAGGCAAAAACATTTCTGATGTTTTAGAAATGACGGTTGAAGATGCTGCTGAG
TTTTTTAGTGCTATTCCAGTTATTCACCGTCGTTTAGAAACCTTAACTCAGGTAGGTCTAGGCTATATTCGTTTAGGTCA
GGCGGCTACTACTTTATCTGGTGGTGAAGCACAGCGTGTCAAACTGGCTCGAGAGTTAGCGAAACGTGATACGGGTAAAA
CGCTTTATATCTTGGATGAACCAACAACAGGTCTGCATTTCCATGATATTGCCAAGTTACTCGATATTTTGCATGAGCTA
CGCAACAAGGGTAATACCATTGTGGTAATTGAACATAACCTTGATGTCATTAAAACAGCAGACTGGGTTGTCGACTTAGG
TCCAGAGGGTGGTTCGGGCGGTGGTATGATCATTGCTGAAGGGACACCTGAACAAGTAGCCGAGGTCGAGATTTCCCATA
CTGGCCGCTTCTTGAAACCGATGTTGAAACAATAA

Domains

Predicted by InterProScan.

UvrA DNA-binding domain (UvrA_DNA-bind)

(292-399)

UvrA interaction domain (UvrA_inter)

(132-237)

ABC transporter (ABC_tran)

(625-862)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D8FGA4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  uvrA Streptococcus pneumoniae R6

56.25

100

0.563
  uvrA Streptococcus pneumoniae TIGR4

56.25

100

0.563
  uvrA Streptococcus pneumoniae D39

56.25

100

0.563

Multiple sequence alignment