Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | C2H93_RS10460 | Genome accession | NZ_CP026036 |
| Coordinates | 2064207..2065277 (-) | Length | 356 a.a. |
| NCBI ID | WP_070547533.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain PK5_16 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2059207..2070277
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2H93_RS10415 (C2H93_10435) | tapA | 2059686..2060447 (-) | 762 | WP_249852183.1 | amyloid fiber anchoring/assembly protein TapA | - |
| C2H93_RS10420 (C2H93_10440) | yqzG | 2060718..2061044 (+) | 327 | WP_038829733.1 | YqzG/YhdC family protein | - |
| C2H93_RS10425 (C2H93_10445) | spoIIT | 2061086..2061265 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| C2H93_RS10430 (C2H93_10450) | comGG | 2061337..2061711 (-) | 375 | WP_064671036.1 | ComG operon protein ComGG | Machinery gene |
| C2H93_RS10435 (C2H93_10455) | comGF | 2061712..2062095 (-) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| C2H93_RS10440 (C2H93_10460) | comGE | 2062121..2062468 (-) | 348 | WP_249852184.1 | ComG operon protein 5 | Machinery gene |
| C2H93_RS10445 (C2H93_10465) | comGD | 2062452..2062883 (-) | 432 | WP_249852185.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| C2H93_RS10450 (C2H93_10470) | comGC | 2062873..2063169 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| C2H93_RS10455 (C2H93_10475) | comGB | 2063183..2064220 (-) | 1038 | WP_086344083.1 | comG operon protein ComGB | Machinery gene |
| C2H93_RS10460 (C2H93_10480) | comGA | 2064207..2065277 (-) | 1071 | WP_070547533.1 | competence protein ComGA | Machinery gene |
| C2H93_RS10465 (C2H93_10485) | - | 2065488..2065685 (-) | 198 | WP_072173931.1 | hypothetical protein | - |
| C2H93_RS10470 (C2H93_10490) | corA | 2065687..2066640 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| C2H93_RS10475 (C2H93_10495) | yqhB | 2066783..2068111 (+) | 1329 | WP_021480026.1 | hemolysin family protein | - |
| C2H93_RS10480 (C2H93_10500) | rsbRD | 2068164..2069000 (-) | 837 | WP_021480027.1 | RsbT co-antagonist protein RsbRD | - |
| C2H93_RS10490 (C2H93_10510) | mgsR | 2069224..2069604 (-) | 381 | WP_003230147.1 | transcriptional regulator MgsR | - |
| C2H93_RS10495 (C2H93_10515) | yqgY | 2069836..2070081 (+) | 246 | WP_003226300.1 | DUF2626 domain-containing protein | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40444.57 Da Isoelectric Point: 8.8402
>NTDB_id=265624 C2H93_RS10460 WP_070547533.1 2064207..2065277(-) (comGA) [Bacillus subtilis strain PK5_16]
MDSIENVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
MDSIENVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHEKD
Nucleotide
Download Length: 1071 bp
>NTDB_id=265624 C2H93_RS10460 WP_070547533.1 2064207..2065277(-) (comGA) [Bacillus subtilis strain PK5_16]
TTGGATTCAATAGAAAATGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATCGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGACTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCGACTGGTTCAGGGAAGACTACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCTGCAGGTCTGAAAGCAATTTTGCGCCATGATCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCCATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACCAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
TTGGATTCAATAGAAAATGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATCGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGGGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGACTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCGTTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCGACTGGTTCAGGGAAGACTACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCTGCAGGTCTGAAAGCAATTTTGCGCCATGATCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTAACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCCATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTGGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGACAGTCAC
GAAATACCAGGAGAGCTAGCGTTTATGAGCTTCTATACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
99.719 |
100 |
0.997 |