Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | C2H93_RS10455 | Genome accession | NZ_CP026036 |
| Coordinates | 2063183..2064220 (-) | Length | 345 a.a. |
| NCBI ID | WP_086344083.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain PK5_16 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2058183..2069220
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2H93_RS10405 (C2H93_10425) | tasA | 2058280..2059065 (-) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| C2H93_RS10410 (C2H93_10430) | sipW | 2059130..2059702 (-) | 573 | WP_249852808.1 | signal peptidase I SipW | - |
| C2H93_RS10415 (C2H93_10435) | tapA | 2059686..2060447 (-) | 762 | WP_249852183.1 | amyloid fiber anchoring/assembly protein TapA | - |
| C2H93_RS10420 (C2H93_10440) | yqzG | 2060718..2061044 (+) | 327 | WP_038829733.1 | YqzG/YhdC family protein | - |
| C2H93_RS10425 (C2H93_10445) | spoIIT | 2061086..2061265 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| C2H93_RS10430 (C2H93_10450) | comGG | 2061337..2061711 (-) | 375 | WP_064671036.1 | ComG operon protein ComGG | Machinery gene |
| C2H93_RS10435 (C2H93_10455) | comGF | 2061712..2062095 (-) | 384 | WP_032726158.1 | ComG operon protein ComGF | Machinery gene |
| C2H93_RS10440 (C2H93_10460) | comGE | 2062121..2062468 (-) | 348 | WP_249852184.1 | ComG operon protein 5 | Machinery gene |
| C2H93_RS10445 (C2H93_10465) | comGD | 2062452..2062883 (-) | 432 | WP_249852185.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| C2H93_RS10450 (C2H93_10470) | comGC | 2062873..2063169 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| C2H93_RS10455 (C2H93_10475) | comGB | 2063183..2064220 (-) | 1038 | WP_086344083.1 | comG operon protein ComGB | Machinery gene |
| C2H93_RS10460 (C2H93_10480) | comGA | 2064207..2065277 (-) | 1071 | WP_070547533.1 | competence protein ComGA | Machinery gene |
| C2H93_RS10465 (C2H93_10485) | - | 2065488..2065685 (-) | 198 | WP_072173931.1 | hypothetical protein | - |
| C2H93_RS10470 (C2H93_10490) | corA | 2065687..2066640 (-) | 954 | WP_004399136.1 | magnesium transporter CorA | - |
| C2H93_RS10475 (C2H93_10495) | yqhB | 2066783..2068111 (+) | 1329 | WP_021480026.1 | hemolysin family protein | - |
| C2H93_RS10480 (C2H93_10500) | rsbRD | 2068164..2069000 (-) | 837 | WP_021480027.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39676.12 Da Isoelectric Point: 9.7153
>NTDB_id=265623 C2H93_RS10455 WP_086344083.1 2063183..2064220(-) (comGB) [Bacillus subtilis strain PK5_16]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTGTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICIRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=265623 C2H93_RS10455 WP_086344083.1 2063183..2064220(-) (comGB) [Bacillus subtilis strain PK5_16]
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGCGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGGTACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.071 |
93.623 |
0.928 |