Detailed information    

insolico Bioinformatically predicted

Overview


Name   degS   Type   Regulator
Locus tag   C2H91_RS13120 Genome accession   NZ_CP026030
Coordinates   2648869..2650026 (+) Length   385 a.a.
NCBI ID   WP_003227983.1    Uniprot ID   A0A199WDV9
Organism   Bacillus subtilis strain PK3_9     
Function   phosphorylation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 2643869..2655026
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H91_RS13100 (C2H91_13120) tuaH 2644346..2645539 (+) 1194 WP_103803439.1 glycosyltransferase family 1 protein -
  C2H91_RS13105 (C2H91_13125) tagO 2645684..2646760 (+) 1077 WP_003227975.1 MraY family glycosyltransferase -
  C2H91_RS13110 (C2H91_13130) tagV 2646833..2647999 (-) 1167 WP_220396509.1 polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV -
  C2H91_RS13115 (C2H91_13135) yvyE 2647999..2648652 (-) 654 WP_003227979.1 YigZ family protein -
  C2H91_RS13120 (C2H91_13140) degS 2648869..2650026 (+) 1158 WP_003227983.1 two-component sensor histidine kinase DegS Regulator
  C2H91_RS13125 (C2H91_13145) degU 2650109..2650798 (+) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  C2H91_RS13130 (C2H91_13150) fakBA 2650896..2651741 (+) 846 WP_003244125.1 DegV family protein -
  C2H91_RS13135 (C2H91_13155) comFA 2651847..2653238 (+) 1392 WP_072173458.1 ATP-dependent helicase ComFA Machinery gene
  C2H91_RS13140 (C2H91_13160) comFB 2653298..2653594 (+) 297 WP_003227989.1 late competence protein ComFB -
  C2H91_RS13145 (C2H91_13165) comFC 2653558..2654280 (+) 723 WP_014481051.1 comF operon protein ComFC Machinery gene
  C2H91_RS13150 (C2H91_13170) yvyF 2654353..2654772 (+) 420 WP_003227995.1 TIGR03826 family flagellar region protein -

Sequence


Protein


Download         Length: 385 a.a.        Molecular weight: 44957.76 Da        Isoelectric Point: 6.2957

>NTDB_id=265282 C2H91_RS13120 WP_003227983.1 2648869..2650026(+) (degS) [Bacillus subtilis strain PK3_9]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=265282 C2H91_RS13120 WP_003227983.1 2648869..2650026(+) (degS) [Bacillus subtilis strain PK3_9]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATCGAGCTTGGCGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAAGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGGATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCCCTTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A199WDV9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degS Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment