Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | C0W57_RS04250 | Genome accession | NZ_CP025939 |
| Coordinates | 753461..753775 (+) | Length | 104 a.a. |
| NCBI ID | WP_029973875.1 | Uniprot ID | - |
| Organism | Bacillus velezensis strain 10075 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 748461..758775
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C0W57_RS04225 (C0W57_04225) | - | 749500..750450 (+) | 951 | WP_014418379.1 | magnesium transporter CorA family protein | - |
| C0W57_RS04230 (C0W57_04230) | comGA | 750643..751713 (+) | 1071 | WP_014418378.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| C0W57_RS04235 (C0W57_04235) | comGB | 751700..752737 (+) | 1038 | WP_014418377.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| C0W57_RS04240 (C0W57_04240) | comGC | 752742..753050 (+) | 309 | WP_014418376.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| C0W57_RS04245 (C0W57_04245) | comGD | 753040..753477 (+) | 438 | WP_007612572.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| C0W57_RS04250 (C0W57_04250) | comGE | 753461..753775 (+) | 315 | WP_029973875.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| C0W57_RS04255 (C0W57_04255) | comGF | 753720..754184 (+) | 465 | WP_233717055.1 | competence type IV pilus minor pilin ComGF | - |
| C0W57_RS04260 (C0W57_04260) | comGG | 754185..754562 (+) | 378 | WP_017418138.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| C0W57_RS04265 (C0W57_04265) | - | 754619..754798 (+) | 180 | WP_003153093.1 | YqzE family protein | - |
| C0W57_RS04270 (C0W57_04270) | - | 754839..755168 (-) | 330 | WP_012117979.1 | DUF3889 domain-containing protein | - |
| C0W57_RS04275 (C0W57_04275) | tapA | 755427..756098 (+) | 672 | WP_014418371.1 | amyloid fiber anchoring/assembly protein TapA | - |
| C0W57_RS04280 (C0W57_04280) | sipW | 756070..756654 (+) | 585 | WP_012117977.1 | signal peptidase I SipW | - |
| C0W57_RS04285 (C0W57_04285) | tasA | 756719..757504 (+) | 786 | WP_007408329.1 | biofilm matrix protein TasA | - |
| C0W57_RS04290 (C0W57_04290) | sinR | 757552..757887 (-) | 336 | WP_003153104.1 | transcriptional regulator SinR | Regulator |
| C0W57_RS04295 (C0W57_04295) | sinI | 757921..758094 (-) | 174 | WP_014418369.1 | anti-repressor SinI | Regulator |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 11862.88 Da Isoelectric Point: 6.9470
>NTDB_id=264609 C0W57_RS04250 WP_029973875.1 753461..753775(+) (comGE) [Bacillus velezensis strain 10075]
MLNGNKGFSTIETLSAMAIWLFLMTSIIPVWTGMMTDGLKIEDRQEAYQLLQKHISTYMMTGKKPPSPGVKWKEDGEYYK
VCAADRGEKEMCLSILKTDWLYAS
MLNGNKGFSTIETLSAMAIWLFLMTSIIPVWTGMMTDGLKIEDRQEAYQLLQKHISTYMMTGKKPPSPGVKWKEDGEYYK
VCAADRGEKEMCLSILKTDWLYAS
Nucleotide
Download Length: 315 bp
>NTDB_id=264609 C0W57_RS04250 WP_029973875.1 753461..753775(+) (comGE) [Bacillus velezensis strain 10075]
ATGCTAAACGGAAATAAGGGGTTCTCTACTATTGAAACACTATCAGCAATGGCCATTTGGCTGTTCCTTATGACGTCTAT
CATTCCGGTCTGGACGGGCATGATGACAGATGGTCTGAAAATAGAAGATCGCCAGGAAGCGTACCAGCTTCTTCAGAAAC
ATATCAGCACTTATATGATGACCGGAAAAAAGCCGCCGTCTCCCGGTGTGAAGTGGAAGGAGGATGGTGAGTATTACAAA
GTGTGTGCGGCTGACCGCGGTGAAAAAGAAATGTGCCTCAGCATTCTCAAAACAGACTGGCTTTACGCTTCTTAA
ATGCTAAACGGAAATAAGGGGTTCTCTACTATTGAAACACTATCAGCAATGGCCATTTGGCTGTTCCTTATGACGTCTAT
CATTCCGGTCTGGACGGGCATGATGACAGATGGTCTGAAAATAGAAGATCGCCAGGAAGCGTACCAGCTTCTTCAGAAAC
ATATCAGCACTTATATGATGACCGGAAAAAAGCCGCCGTCTCCCGGTGTGAAGTGGAAGGAGGATGGTGAGTATTACAAA
GTGTGTGCGGCTGACCGCGGTGAAAAAGAAATGTGCCTCAGCATTCTCAAAACAGACTGGCTTTACGCTTCTTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Bacillus subtilis subsp. subtilis str. 168 |
44.348 |
100 |
0.49 |