Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | C1S76_RS12900 | Genome accession | NZ_CP025796 |
| Coordinates | 2705696..2706274 (+) | Length | 192 a.a. |
| NCBI ID | WP_005438427.1 | Uniprot ID | A0A0C1W3A3 |
| Organism | Vibrio owensii strain 051011B | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2700696..2711274
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1S76_RS12885 | oxyR | 2700972..2701880 (+) | 909 | WP_033005806.1 | DNA-binding transcriptional regulator OxyR | - |
| C1S76_RS12890 | - | 2701947..2704517 (-) | 2571 | WP_045412019.1 | penicillin-binding protein 1A | - |
| C1S76_RS12895 | pilM | 2704696..2705712 (+) | 1017 | WP_045412016.1 | type IV pilus biogenesis protein PilM | Machinery gene |
| C1S76_RS12900 | pilN | 2705696..2706274 (+) | 579 | WP_005438427.1 | PilN domain-containing protein | Machinery gene |
| C1S76_RS12905 | pilO | 2706267..2706860 (+) | 594 | WP_009705519.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| C1S76_RS12910 | pilP | 2706850..2707365 (+) | 516 | WP_005438430.1 | pilus assembly protein PilP | Machinery gene |
| C1S76_RS12915 | pilQ | 2707400..2709148 (+) | 1749 | WP_045412013.1 | type IV pilus secretin PilQ | Machinery gene |
| C1S76_RS12920 | aroK | 2709338..2709856 (+) | 519 | WP_005438434.1 | shikimate kinase AroK | - |
| C1S76_RS12925 | aroB | 2709888..2710988 (+) | 1101 | WP_005438436.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22231.64 Da Isoelectric Point: 9.4720
>NTDB_id=263886 C1S76_RS12900 WP_005438427.1 2705696..2706274(+) (pilN) [Vibrio owensii strain 051011B]
MLHHINLLAWRENQREEHRRRFIGLIVLGAIAALGVQWGIGKYYQYQQDQQQQRLDYLAHYISQLDKRIEAMKIAEQEHG
KILERLKIVEGLQNGRNKTTEFMNLMPSVIPEGVYVDKIKMNDYEIEISGISDSTPRLATMLDNMERSAKLLDVEMHSIV
HGKARFGKEFQTFKVSFMFKGASIKEGGKQHG
MLHHINLLAWRENQREEHRRRFIGLIVLGAIAALGVQWGIGKYYQYQQDQQQQRLDYLAHYISQLDKRIEAMKIAEQEHG
KILERLKIVEGLQNGRNKTTEFMNLMPSVIPEGVYVDKIKMNDYEIEISGISDSTPRLATMLDNMERSAKLLDVEMHSIV
HGKARFGKEFQTFKVSFMFKGASIKEGGKQHG
Nucleotide
Download Length: 579 bp
>NTDB_id=263886 C1S76_RS12900 WP_005438427.1 2705696..2706274(+) (pilN) [Vibrio owensii strain 051011B]
ATGCTGCATCACATTAACCTCCTCGCTTGGCGCGAAAATCAACGTGAAGAACATCGTCGACGTTTTATTGGTTTGATTGT
TCTTGGTGCGATTGCTGCGCTGGGCGTGCAGTGGGGCATCGGTAAGTACTACCAATACCAACAAGACCAGCAACAACAGC
GCCTAGACTATTTAGCTCACTATATATCTCAGCTTGATAAGCGAATTGAAGCAATGAAGATTGCTGAGCAAGAGCACGGC
AAGATCTTAGAACGCTTAAAGATCGTTGAAGGATTACAAAACGGGCGCAATAAAACCACTGAGTTCATGAACTTGATGCC
ATCAGTGATTCCTGAAGGCGTGTATGTCGACAAGATTAAGATGAATGACTACGAAATCGAGATCTCAGGAATTTCAGACA
GTACGCCGCGTCTCGCGACAATGCTCGACAACATGGAGCGTTCAGCAAAATTGTTAGACGTCGAGATGCACTCCATTGTC
CATGGTAAAGCCCGTTTCGGTAAAGAGTTTCAGACGTTCAAAGTCTCCTTCATGTTTAAAGGTGCCTCTATAAAAGAAGG
AGGTAAACAGCATGGTTAA
ATGCTGCATCACATTAACCTCCTCGCTTGGCGCGAAAATCAACGTGAAGAACATCGTCGACGTTTTATTGGTTTGATTGT
TCTTGGTGCGATTGCTGCGCTGGGCGTGCAGTGGGGCATCGGTAAGTACTACCAATACCAACAAGACCAGCAACAACAGC
GCCTAGACTATTTAGCTCACTATATATCTCAGCTTGATAAGCGAATTGAAGCAATGAAGATTGCTGAGCAAGAGCACGGC
AAGATCTTAGAACGCTTAAAGATCGTTGAAGGATTACAAAACGGGCGCAATAAAACCACTGAGTTCATGAACTTGATGCC
ATCAGTGATTCCTGAAGGCGTGTATGTCGACAAGATTAAGATGAATGACTACGAAATCGAGATCTCAGGAATTTCAGACA
GTACGCCGCGTCTCGCGACAATGCTCGACAACATGGAGCGTTCAGCAAAATTGTTAGACGTCGAGATGCACTCCATTGTC
CATGGTAAAGCCCGTTTCGGTAAAGAGTTTCAGACGTTCAAAGTCTCCTTCATGTTTAAAGGTGCCTCTATAAAAGAAGG
AGGTAAACAGCATGGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Vibrio campbellii strain DS40M4 |
95.312 |
100 |
0.953 |
| pilN | Vibrio cholerae strain A1552 |
58.854 |
100 |
0.589 |