Detailed information
Bioinformatically predicted
Overview
| Name | ruvA | Type | Machinery gene |
| Locus tag | APL_RS01465 | Genome accession | NC_009053 |
| Coordinates | 313035..313640 (+) | Length | 201 a.a. |
| NCBI ID | WP_005600357.1 | Uniprot ID | A0A9X4G287 |
| Organism | Actinobacillus pleuropneumoniae serovar 5b str. L20 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 308035..318640
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APL_RS01450 (APL_0280) | potA | 310158..311273 (+) | 1116 | WP_005600350.1 | spermidine/putrescine ABC transporter ATP-binding protein PotA | - |
| APL_RS01455 (APL_0281) | potB | 311260..312126 (+) | 867 | WP_005603539.1 | spermidine/putrescine ABC transporter permease PotB | - |
| APL_RS01460 (APL_0282) | potC | 312126..312893 (+) | 768 | WP_043880758.1 | spermidine/putrescine ABC transporter permease PotC | - |
| APL_RS01465 (APL_0283) | ruvA | 313035..313640 (+) | 606 | WP_005600357.1 | Holliday junction branch migration protein RuvA | Machinery gene |
| APL_RS01470 (APL_0284) | ruvB | 313659..314663 (+) | 1005 | WP_005600359.1 | Holliday junction branch migration DNA helicase RuvB | Machinery gene |
| APL_RS01475 (APL_0285) | ubiG | 314720..315424 (-) | 705 | WP_005611396.1 | bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG | - |
| APL_RS01480 (APL_0286) | gyrA | 315604..318294 (+) | 2691 | WP_009874680.1 | DNA topoisomerase (ATP-hydrolyzing) subunit A | - |
Sequence
Protein
Download Length: 201 a.a. Molecular weight: 22065.58 Da Isoelectric Point: 6.7667
>NTDB_id=26365 APL_RS01465 WP_005600357.1 313035..313640(+) (ruvA) [Actinobacillus pleuropneumoniae serovar 5b str. L20]
MIGRLHGKIIEKQPPEMVIDVQGVGYEVLLPMTSFYSLPQVGEEATIFTHLVVREDAHLLFGFAQKQDRTLFRELIKTNG
VGPKLALAILSAMSVSQFANAVENEELAKLTKIPGIGRKTAERLLVELKGKFKGVAQSDFFEEHSVETIVATHSHDPADE
ARDALVALGYKLADAEKMIKKVNKAGATSEQLIREALKASL
MIGRLHGKIIEKQPPEMVIDVQGVGYEVLLPMTSFYSLPQVGEEATIFTHLVVREDAHLLFGFAQKQDRTLFRELIKTNG
VGPKLALAILSAMSVSQFANAVENEELAKLTKIPGIGRKTAERLLVELKGKFKGVAQSDFFEEHSVETIVATHSHDPADE
ARDALVALGYKLADAEKMIKKVNKAGATSEQLIREALKASL
Nucleotide
Download Length: 606 bp
>NTDB_id=26365 APL_RS01465 WP_005600357.1 313035..313640(+) (ruvA) [Actinobacillus pleuropneumoniae serovar 5b str. L20]
ATGATCGGAAGATTACACGGTAAAATTATTGAAAAACAACCGCCTGAAATGGTAATTGATGTCCAAGGTGTCGGGTATGA
AGTGCTATTGCCGATGACGAGCTTTTACAGCTTGCCGCAAGTAGGTGAAGAAGCCACTATTTTTACGCATTTAGTCGTAC
GTGAAGATGCACATTTATTATTTGGTTTTGCACAAAAGCAAGATAGAACTTTATTTCGTGAATTGATTAAAACCAACGGT
GTAGGGCCTAAATTAGCCCTTGCGATTTTATCAGCAATGTCAGTTTCACAATTTGCCAATGCTGTTGAAAATGAAGAACT
TGCCAAATTAACTAAAATTCCGGGCATTGGGCGTAAGACAGCCGAGCGTTTATTAGTAGAACTCAAAGGCAAATTCAAAG
GTGTGGCACAAAGTGATTTCTTTGAAGAGCATTCGGTTGAAACGATTGTTGCAACACATTCGCACGATCCGGCAGATGAA
GCCCGTGATGCTTTAGTAGCGTTAGGCTATAAACTCGCTGATGCTGAGAAGATGATTAAGAAAGTGAATAAAGCGGGTGC
AACCAGCGAACAATTAATTCGTGAAGCATTAAAAGCCTCTCTTTAA
ATGATCGGAAGATTACACGGTAAAATTATTGAAAAACAACCGCCTGAAATGGTAATTGATGTCCAAGGTGTCGGGTATGA
AGTGCTATTGCCGATGACGAGCTTTTACAGCTTGCCGCAAGTAGGTGAAGAAGCCACTATTTTTACGCATTTAGTCGTAC
GTGAAGATGCACATTTATTATTTGGTTTTGCACAAAAGCAAGATAGAACTTTATTTCGTGAATTGATTAAAACCAACGGT
GTAGGGCCTAAATTAGCCCTTGCGATTTTATCAGCAATGTCAGTTTCACAATTTGCCAATGCTGTTGAAAATGAAGAACT
TGCCAAATTAACTAAAATTCCGGGCATTGGGCGTAAGACAGCCGAGCGTTTATTAGTAGAACTCAAAGGCAAATTCAAAG
GTGTGGCACAAAGTGATTTCTTTGAAGAGCATTCGGTTGAAACGATTGTTGCAACACATTCGCACGATCCGGCAGATGAA
GCCCGTGATGCTTTAGTAGCGTTAGGCTATAAACTCGCTGATGCTGAGAAGATGATTAAGAAAGTGAATAAAGCGGGTGC
AACCAGCGAACAATTAATTCGTGAAGCATTAAAAGCCTCTCTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ruvA | Bacillus subtilis subsp. subtilis str. 168 |
36.667 |
100 |
0.383 |
| ruvA | Streptococcus pneumoniae TIGR4 |
37.374 |
98.507 |
0.368 |
| ruvA | Streptococcus pneumoniae R6 |
36.869 |
98.507 |
0.363 |
| ruvA | Streptococcus pneumoniae D39 |
36.869 |
98.507 |
0.363 |