Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | DV114_RS07735 | Genome accession | NZ_CP031251 |
| Coordinates | 1614376..1614834 (+) | Length | 152 a.a. |
| NCBI ID | WP_114926327.1 | Uniprot ID | A0A9X9QYS6 |
| Organism | Neisseria subflava strain M18660 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1609376..1619834
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DV114_RS07720 | - | 1610159..1610455 (+) | 297 | WP_003680870.1 | helix-turn-helix transcriptional regulator | - |
| DV114_RS07725 | glnD | 1610475..1613033 (+) | 2559 | WP_114926325.1 | [protein-PII] uridylyltransferase | - |
| DV114_RS07730 | pilE | 1613826..1614293 (+) | 468 | WP_114926326.1 | pilin | Machinery gene |
| DV114_RS07735 | pilE | 1614376..1614834 (+) | 459 | WP_114926327.1 | pilin | Machinery gene |
| DV114_RS07740 | - | 1615263..1616789 (-) | 1527 | WP_114926328.1 | DHA2 family efflux MFS transporter permease subunit | - |
| DV114_RS07745 | - | 1616891..1618081 (-) | 1191 | WP_107697170.1 | efflux RND transporter periplasmic adaptor subunit | - |
| DV114_RS07750 | - | 1618305..1619711 (-) | 1407 | WP_107697169.1 | efflux transporter outer membrane subunit | - |
Sequence
Protein
Download Length: 152 a.a. Molecular weight: 16212.87 Da Isoelectric Point: 8.9818
>NTDB_id=263618 DV114_RS07735 WP_114926327.1 1614376..1614834(+) (pilE) [Neisseria subflava strain M18660]
MKKLRKAQTGFSLIELMIVIGIIGILAVAALPAYQNYVARAQVAEGIMLAGSMKSYVEEAYADKGSLPLDLNIKQLASDD
NKVGNYVKIVRIEDNGTIVAAIGNQAAVPVKNTEIHLTPSFAKTGNTKGTTVWSCGGTMDTHFLPVSCKQSL
MKKLRKAQTGFSLIELMIVIGIIGILAVAALPAYQNYVARAQVAEGIMLAGSMKSYVEEAYADKGSLPLDLNIKQLASDD
NKVGNYVKIVRIEDNGTIVAAIGNQAAVPVKNTEIHLTPSFAKTGNTKGTTVWSCGGTMDTHFLPVSCKQSL
Nucleotide
Download Length: 459 bp
>NTDB_id=263618 DV114_RS07735 WP_114926327.1 1614376..1614834(+) (pilE) [Neisseria subflava strain M18660]
ATGAAAAAACTACGCAAAGCCCAAACCGGCTTTAGCCTGATTGAGTTGATGATTGTTATCGGCATCATCGGCATTTTGGC
AGTAGCGGCTCTTCCTGCATACCAAAACTACGTTGCCAGAGCACAAGTAGCAGAAGGCATCATGCTGGCAGGCAGTATGA
AAAGCTACGTCGAAGAAGCCTATGCGGATAAAGGCAGCTTACCGCTTGACCTCAATATCAAGCAACTCGCTTCAGACGAC
AATAAAGTCGGTAACTATGTAAAGATTGTCCGTATTGAAGATAACGGCACTATTGTTGCCGCCATCGGCAATCAAGCCGC
TGTTCCCGTGAAGAATACCGAAATCCACCTGACACCAAGTTTTGCAAAAACAGGTAATACCAAAGGCACAACAGTTTGGT
CTTGCGGTGGCACCATGGATACACACTTCCTTCCTGTGTCCTGCAAACAGAGCCTGTAA
ATGAAAAAACTACGCAAAGCCCAAACCGGCTTTAGCCTGATTGAGTTGATGATTGTTATCGGCATCATCGGCATTTTGGC
AGTAGCGGCTCTTCCTGCATACCAAAACTACGTTGCCAGAGCACAAGTAGCAGAAGGCATCATGCTGGCAGGCAGTATGA
AAAGCTACGTCGAAGAAGCCTATGCGGATAAAGGCAGCTTACCGCTTGACCTCAATATCAAGCAACTCGCTTCAGACGAC
AATAAAGTCGGTAACTATGTAAAGATTGTCCGTATTGAAGATAACGGCACTATTGTTGCCGCCATCGGCAATCAAGCCGC
TGTTCCCGTGAAGAATACCGAAATCCACCTGACACCAAGTTTTGCAAAAACAGGTAATACCAAAGGCACAACAGTTTGGT
CTTGCGGTGGCACCATGGATACACACTTCCTTCCTGTGTCCTGCAAACAGAGCCTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae strain FA1090 |
38.994 |
100 |
0.408 |
| pilE | Neisseria gonorrhoeae MS11 |
38.125 |
100 |
0.401 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
39.161 |
94.079 |
0.368 |
| pilA2 | Legionella pneumophila str. Paris |
37.584 |
98.026 |
0.368 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
32 |
100 |
0.368 |