Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | C0119_RS13980 | Genome accession | NZ_CP025618 |
| Coordinates | 2890874..2891455 (-) | Length | 193 a.a. |
| NCBI ID | WP_048882202.1 | Uniprot ID | - |
| Organism | Acinetobacter schindleri strain SGAir0122 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2885874..2896455
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C0119_RS13955 (C0119_08340) | - | 2885920..2887227 (-) | 1308 | WP_005220638.1 | FAD-dependent oxidoreductase | - |
| C0119_RS13960 (C0119_08335) | - | 2887641..2888519 (-) | 879 | WP_108675740.1 | pirin family protein | - |
| C0119_RS13965 (C0119_08330) | ahpC | 2888845..2889408 (-) | 564 | WP_048882204.1 | alkyl hydroperoxide reductase subunit C | - |
| C0119_RS13970 (C0119_08325) | - | 2889576..2890190 (-) | 615 | Protein_2695 | TetR/AcrR family transcriptional regulator | - |
| C0119_RS13975 (C0119_08320) | - | 2890335..2890820 (+) | 486 | WP_048882203.1 | hotdog fold domain-containing protein | - |
| C0119_RS13980 (C0119_08315) | ssb | 2890874..2891455 (-) | 582 | WP_048882202.1 | single-stranded DNA-binding protein | Machinery gene |
| C0119_RS13985 (C0119_08310) | - | 2891507..2892871 (-) | 1365 | WP_048882201.1 | MFS transporter | - |
| C0119_RS13990 (C0119_08305) | - | 2893026..2894114 (-) | 1089 | WP_048882200.1 | DUF475 domain-containing protein | - |
| C0119_RS13995 (C0119_08300) | tenA | 2894337..2895005 (+) | 669 | WP_048882199.1 | thiaminase II | - |
Sequence
Protein
Download Length: 193 a.a. Molecular weight: 21006.81 Da Isoelectric Point: 6.4820
>NTDB_id=263070 C0119_RS13980 WP_048882202.1 2890874..2891455(-) (ssb) [Acinetobacter schindleri strain SGAir0122]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSDSWTDKNTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQSGQERYTTEIRGEQMQMLDSGRPQGEQSDNGGFAQPRFNNNQGSYGNNNAGQQGYNAPQQGGFNNAPAGG
NGYGNNNPSGFAPKSAPAPVAAPAADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSDSWTDKNTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQSGQERYTTEIRGEQMQMLDSGRPQGEQSDNGGFAQPRFNNNQGSYGNNNAGQQGYNAPQQGGFNNAPAGG
NGYGNNNPSGFAPKSAPAPVAAPAADLDDDLPF
Nucleotide
Download Length: 582 bp
>NTDB_id=263070 C0119_RS13980 WP_048882202.1 2890874..2891455(-) (ssb) [Acinetobacter schindleri strain SGAir0122]
ATGCGTGGTGTAAATAAGGTTATTTTAGTAGGTACTTTAGGTCGAGATCCTGAAACAAAAACTTTCCCAAATGGGGGTTC
TCTCACTCAATTCTCTATCGCGACCAGTGATTCGTGGACGGATAAGAACACTGGTGAGCGTAAAGAGCAAACAGAATGGC
ACCGCATTGTGCTGCATAACCGTTTAGGTGAAATTGCACAGCAGTATCTACGTAAAGGTTCTAAAGTCTATATCGAAGGT
TCACTACGTACCCGTCAGTGGACAGACCAAAGTGGTCAAGAGCGTTACACCACAGAAATCCGTGGTGAGCAGATGCAAAT
GCTGGATTCTGGCCGTCCTCAAGGTGAACAGTCAGACAATGGCGGTTTTGCACAGCCACGTTTCAACAATAACCAGGGCA
GCTATGGCAATAACAATGCTGGTCAACAAGGTTATAATGCACCACAGCAAGGTGGCTTCAATAATGCACCTGCGGGTGGC
AATGGCTATGGCAATAACAACCCAAGCGGTTTTGCGCCAAAATCTGCACCAGCTCCAGTTGCAGCGCCTGCAGCAGACCT
GGATGATGACTTACCGTTTTGA
ATGCGTGGTGTAAATAAGGTTATTTTAGTAGGTACTTTAGGTCGAGATCCTGAAACAAAAACTTTCCCAAATGGGGGTTC
TCTCACTCAATTCTCTATCGCGACCAGTGATTCGTGGACGGATAAGAACACTGGTGAGCGTAAAGAGCAAACAGAATGGC
ACCGCATTGTGCTGCATAACCGTTTAGGTGAAATTGCACAGCAGTATCTACGTAAAGGTTCTAAAGTCTATATCGAAGGT
TCACTACGTACCCGTCAGTGGACAGACCAAAGTGGTCAAGAGCGTTACACCACAGAAATCCGTGGTGAGCAGATGCAAAT
GCTGGATTCTGGCCGTCCTCAAGGTGAACAGTCAGACAATGGCGGTTTTGCACAGCCACGTTTCAACAATAACCAGGGCA
GCTATGGCAATAACAATGCTGGTCAACAAGGTTATAATGCACCACAGCAAGGTGGCTTCAATAATGCACCTGCGGGTGGC
AATGGCTATGGCAATAACAACCCAAGCGGTTTTGCGCCAAAATCTGCACCAGCTCCAGTTGCAGCGCCTGCAGCAGACCT
GGATGATGACTTACCGTTTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
51.031 |
100 |
0.513 |
| ssb | Vibrio cholerae strain A1552 |
45.178 |
100 |
0.461 |
| ssb | Neisseria gonorrhoeae MS11 |
41.053 |
98.446 |
0.404 |
| ssb | Neisseria meningitidis MC58 |
40.526 |
98.446 |
0.399 |