Detailed information NTG0263054

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: C0119_RS07480
• Genome accession: NZ_CP025618
• Coordinates: 1511687..1512865 (+)
• Length: 392 a.a.
• NCBI ID: WP_004809521.1
• Uniprot ID: -
• Organism: Acinetobacter schindleri strain SGAir0122
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1506687..1517865

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C0119_RS07465 (C0119_14840)	-	1508024..1509136 (+)	1113	WP_004809527.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	-
C0119_RS07470 (C0119_14835)	-	1509342..1509872 (+)	531	WP_004809525.1	hypothetical protein	-
C0119_RS07475 (C0119_14830)	-	1510394..1511443 (+)	1050	WP_108676000.1	3-deoxy-7-phosphoheptulonate synthase	-
C0119_RS07480 (C0119_14825)	pilU	1511687..1512865 (+)	1179	WP_004809521.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
C0119_RS07485 (C0119_14820)	pilU	1513275..1514480 (+)	1206	WP_004809519.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
C0119_RS07490 (C0119_14815)	-	1514538..1515716 (-)	1179	WP_004809517.1	MFS transporter	-
C0119_RS07495 (C0119_14810)	gcvH	1515948..1516322 (-)	375	WP_004809515.1	glycine cleavage system protein GcvH	-
C0119_RS07500 (C0119_14805)	-	1516395..1517423 (-)	1029	WP_004809513.1	AraC family transcriptional regulator	-

Sequence

Protein

• Length: 392 a.a.
• Molecular weight: 44522.16 Da
• Isoelectric Point: 6.5062

>NTDB_id=263054 C0119_RS07480 WP_004809521.1 1511687..1512865(+) (pilU) [Acinetobacter schindleri strain SGAir0122]
MYTPELLDEARKFMHHMLTKVVEYGGSDLFITADFPPSIKQQGLMKPFGQQKLAADKTRLFAYALMNERQIKEFESVMEC
NFGISVPGVSRFRVNVFQQQHNVGMVIRTITTEIPSFQQLGLPNSLQQVIMEKRGLVLIVGATGVGKSTTLAAMIDHRNT
YSEGHIITMEDPVEYVYQHKKSMITQREIGVDCVSWHNALINTMRQAPDVIVIGEIRDTESMEHAIAFAESGHLCLATLH
SNNADQALDRIINFFPEERRNQLLMDLSANMKAVISQRLIRIEDGQGRRAAVEILLNTPLVSDFIRKGDFYELKTIMARS
RELGMQTFDQALFDLYNQGIISYDEALRNADSSNEMRLQIKLKSSRINPALQEEGSRMTILEQSKETTLSRI

Nucleotide

• Length: 1179 bp

>NTDB_id=263054 C0119_RS07480 WP_004809521.1 1511687..1512865(+) (pilU) [Acinetobacter schindleri strain SGAir0122]
ATGTATACACCCGAATTGCTCGATGAAGCACGTAAATTTATGCACCATATGCTGACCAAAGTGGTTGAATATGGAGGTTC
CGATCTTTTTATTACCGCAGATTTTCCACCAAGTATCAAACAGCAGGGCTTGATGAAACCTTTTGGTCAGCAAAAACTGG
CAGCGGATAAAACCCGTTTGTTTGCCTATGCTTTAATGAATGAACGACAGATCAAGGAATTTGAATCAGTGATGGAATGC
AATTTCGGTATCAGTGTACCGGGTGTATCACGCTTCCGGGTCAATGTCTTTCAGCAACAGCATAATGTTGGGATGGTAAT
CAGAACCATTACTACGGAGATTCCAAGCTTTCAGCAATTAGGACTACCAAACTCTTTGCAACAAGTGATTATGGAAAAAC
GTGGGCTGGTTCTGATTGTAGGTGCGACAGGTGTTGGTAAATCCACCACACTGGCAGCCATGATTGATCACCGCAATACC
TATTCTGAAGGACATATTATTACCATGGAAGATCCGGTGGAATACGTGTATCAACATAAAAAGTCCATGATTACCCAACG
TGAAATTGGCGTAGATTGTGTTTCTTGGCATAACGCGCTGATCAATACCATGCGTCAGGCACCGGATGTGATCGTGATTG
GTGAAATCCGGGATACCGAAAGTATGGAGCATGCGATTGCCTTTGCTGAATCCGGTCATCTGTGTTTGGCCACCCTGCAT
TCTAATAATGCCGATCAGGCTTTAGACCGCATTATTAATTTCTTCCCGGAAGAACGCCGCAATCAGCTGTTAATGGATTT
ATCCGCCAATATGAAAGCTGTGATTTCGCAACGTTTGATCCGTATCGAGGATGGGCAAGGTCGTCGTGCTGCCGTTGAAA
TTTTATTGAATACGCCGCTGGTGTCTGATTTTATCCGTAAAGGAGATTTTTACGAGCTGAAAACTATTATGGCGCGTTCG
CGTGAACTCGGCATGCAGACCTTTGATCAGGCATTATTTGATTTGTATAACCAGGGAATTATTTCTTATGACGAAGCTTT
GCGTAATGCAGATTCAAGTAATGAAATGCGTTTGCAGATCAAATTAAAAAGCAGTCGCATCAATCCCGCTCTTCAGGAAG
AAGGGAGTAGGATGACGATACTGGAACAATCCAAGGAAACTACACTTTCCAGAATCTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (64-281)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Pseudomonas stutzeri DSM 10701	57.759	88.776	0.513
pilU	Acinetobacter baylyi ADP1	53.804	93.878	0.505
pilU	Vibrio cholerae strain A1552	49.859	90.561	0.452
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.773	86.48	0.37