Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | CAB17_RS02090 | Genome accession | NZ_CP025491 |
| Coordinates | 456721..457320 (+) | Length | 199 a.a. |
| NCBI ID | WP_101899784.1 | Uniprot ID | A0A2H5FKP6 |
| Organism | Legionella sainthelensi strain LA01-117 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 451721..462320
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CAB17_RS02075 (CAB17_08700) | - | 453431..454855 (-) | 1425 | WP_101899782.1 | M protein | - |
| CAB17_RS02080 (CAB17_08705) | pilM | 455092..456156 (+) | 1065 | WP_101901588.1 | type IV pilus assembly protein PilM | Machinery gene |
| CAB17_RS02085 (CAB17_08710) | pilN | 456161..456724 (+) | 564 | WP_101899783.1 | PilN domain-containing protein | Machinery gene |
| CAB17_RS02090 (CAB17_08715) | pilO | 456721..457320 (+) | 600 | WP_101899784.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| CAB17_RS02095 (CAB17_08720) | pilP | 457317..457823 (+) | 507 | WP_101899785.1 | pilus assembly protein PilP | Machinery gene |
| CAB17_RS02100 (CAB17_08725) | pilQ | 457832..459937 (+) | 2106 | Protein_416 | type IV pilus secretin PilQ | - |
| CAB17_RS02105 (CAB17_08730) | aroK | 460261..460788 (+) | 528 | WP_003632469.1 | shikimate kinase AroK | - |
| CAB17_RS02110 (CAB17_08735) | aroB | 460775..461878 (+) | 1104 | WP_101899786.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 22728.41 Da Isoelectric Point: 5.3105
>NTDB_id=261975 CAB17_RS02090 WP_101899784.1 456721..457320(+) (pilO) [Legionella sainthelensi strain LA01-117]
MNSINLSELTLENVGQWPLVVKIGMLLGTSLLIIALGYWLIIQDNFTQFDTLKQQETTLKADFENKQRQLYNLPAYRAQL
KTLADRFALVLTQLPEKNEMPGLLEEVSKTGVASGLRFELFAPQPEVVHDFYIELPIKISVVGTYFQLAMFISRVAEMTR
IVTLHDFSIEGVSSKDHKVISEDELVMNITAKIYRYRAQ
MNSINLSELTLENVGQWPLVVKIGMLLGTSLLIIALGYWLIIQDNFTQFDTLKQQETTLKADFENKQRQLYNLPAYRAQL
KTLADRFALVLTQLPEKNEMPGLLEEVSKTGVASGLRFELFAPQPEVVHDFYIELPIKISVVGTYFQLAMFISRVAEMTR
IVTLHDFSIEGVSSKDHKVISEDELVMNITAKIYRYRAQ
Nucleotide
Download Length: 600 bp
>NTDB_id=261975 CAB17_RS02090 WP_101899784.1 456721..457320(+) (pilO) [Legionella sainthelensi strain LA01-117]
ATGAACAGTATTAATCTTAGTGAATTAACCTTGGAAAATGTAGGACAATGGCCACTAGTAGTAAAAATTGGAATGCTTTT
AGGTACGAGCTTATTAATTATCGCATTGGGATATTGGCTTATTATTCAAGATAATTTTACTCAGTTTGATACACTAAAAC
AGCAAGAAACAACGTTAAAAGCAGATTTTGAAAACAAACAACGTCAACTGTATAATTTACCTGCTTATCGTGCCCAATTA
AAGACGTTGGCTGACCGCTTTGCTTTGGTGCTTACTCAGCTCCCTGAAAAAAATGAAATGCCTGGTTTACTTGAAGAAGT
TTCCAAGACAGGAGTTGCATCAGGTTTAAGGTTTGAGTTATTTGCTCCTCAACCAGAGGTAGTTCATGATTTTTATATAG
AATTACCAATAAAAATTTCAGTAGTAGGGACTTATTTTCAATTAGCAATGTTTATAAGTCGAGTGGCTGAAATGACAAGA
ATTGTTACCTTACATGACTTTAGTATTGAAGGAGTATCTTCTAAAGACCATAAGGTTATTTCAGAGGATGAATTGGTGAT
GAATATTACCGCAAAAATATATCGATATCGCGCACAATGA
ATGAACAGTATTAATCTTAGTGAATTAACCTTGGAAAATGTAGGACAATGGCCACTAGTAGTAAAAATTGGAATGCTTTT
AGGTACGAGCTTATTAATTATCGCATTGGGATATTGGCTTATTATTCAAGATAATTTTACTCAGTTTGATACACTAAAAC
AGCAAGAAACAACGTTAAAAGCAGATTTTGAAAACAAACAACGTCAACTGTATAATTTACCTGCTTATCGTGCCCAATTA
AAGACGTTGGCTGACCGCTTTGCTTTGGTGCTTACTCAGCTCCCTGAAAAAAATGAAATGCCTGGTTTACTTGAAGAAGT
TTCCAAGACAGGAGTTGCATCAGGTTTAAGGTTTGAGTTATTTGCTCCTCAACCAGAGGTAGTTCATGATTTTTATATAG
AATTACCAATAAAAATTTCAGTAGTAGGGACTTATTTTCAATTAGCAATGTTTATAAGTCGAGTGGCTGAAATGACAAGA
ATTGTTACCTTACATGACTTTAGTATTGAAGGAGTATCTTCTAAAGACCATAAGGTTATTTCAGAGGATGAATTGGTGAT
GAATATTACCGCAAAAATATATCGATATCGCGCACAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
69.849 |
100 |
0.698 |
| comO | Acinetobacter baylyi ADP1 |
41.489 |
94.472 |
0.392 |
| pilO | Acinetobacter baumannii D1279779 |
38.421 |
95.477 |
0.367 |